RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 VGLL3A8MV65 326 aa18.92■□□□□ 0.62
UPK3B-202ENST00000334348 UBAP1LF5GYI3 381 aa18.92■□□□□ 0.62
UPK3B-202ENST00000334348 ATP8B1O43520 1251 aa18.92■□□□□ 0.62
UPK3B-202ENST00000334348 SMC2O95347 1197 aa18.92■□□□□ 0.62
UPK3B-202ENST00000334348 SRRTQ9BXP5 876 aaKnown RBP18.92■□□□□ 0.62
UPK3B-202ENST00000334348 IFNKQ9P0W0 207 aa18.92■□□□□ 0.62
UPK3B-202ENST00000334348 KSR2Q6VAB6 950 aa18.92■□□□□ 0.62
UPK3B-202ENST00000334348 MRPS27Q92552 414 aaKnown RBP18.92■□□□□ 0.62
UPK3B-202ENST00000334348 NAP1L2Q9ULW6 460 aaPredicted RBP18.92■□□□□ 0.62
UPK3B-202ENST00000334348 MED1Q15648 1581 aaPredicted RBP18.92■□□□□ 0.62
UPK3B-202ENST00000334348 COL15A1P39059 1388 aa18.92■□□□□ 0.62
UPK3B-202ENST00000334348 ERCC4Q92889 916 aaPredicted RBP18.91■□□□□ 0.62
UPK3B-202ENST00000334348 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
UPK3B-202ENST00000334348 SUCLG2Q96I99 432 aa18.91■□□□□ 0.62
UPK3B-202ENST00000334348 SDF4Q9BRK5 362 aa18.91■□□□□ 0.62
UPK3B-202ENST00000334348 KCNQ3O43525 872 aa18.91■□□□□ 0.62
UPK3B-202ENST00000334348 TPM1P09493 284 aa18.91■□□□□ 0.62
UPK3B-202ENST00000334348 IPO4Q8TEX9 1081 aaKnown RBP18.91■□□□□ 0.62
UPK3B-202ENST00000334348 KAZALD1Q96I82 304 aa18.91■□□□□ 0.62
UPK3B-202ENST00000334348 KIAA1468Q9P260 1216 aa18.91■□□□□ 0.62
UPK3B-202ENST00000334348 UTYO14607 1347 aa18.91■□□□□ 0.62
UPK3B-202ENST00000334348 A0A1W2PQ27 194 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 A0A1W2PQ64 194 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 A0A1W2PQD8 194 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 PTPDC1A2A3K4 754 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 CTDNEP1O95476 244 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 CWF19L2Q2TBE0 894 aaKnown RBP18.9■□□□□ 0.62
UPK3B-202ENST00000334348 ADALQ6DHV7 355 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 HOMER1Q86YM7 354 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 NGDNQ8NEJ9 315 aaKnown RBP18.9■□□□□ 0.62
UPK3B-202ENST00000334348 UBXN6Q9BZV1 441 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 GRM8O00222 908 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 CYP21A2P08686 494 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 DPCR1Q3MIW9 517 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 BRINP3Q76B58 766 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 FBXW7Q969H0 707 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 BICC1Q9H694 974 aaKnown RBP18.9■□□□□ 0.62
UPK3B-202ENST00000334348 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 DNAI1Q9UI46 699 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 PCDHA7Q9UN72 937 aa18.9■□□□□ 0.62
UPK3B-202ENST00000334348 HMGB1P09429 215 aaKnown RBP18.89■□□□□ 0.61
UPK3B-202ENST00000334348 NLRP6P59044 892 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 ZRSR1Q15695 479 aaKnown RBP18.89■□□□□ 0.61
UPK3B-202ENST00000334348 TXLNBQ8N3L3 684 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 EFCAB8A8MWE9 144 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 TADA3O75528 432 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 FOSBP53539 338 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 PDE4CQ08493 712 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 ILDR1Q86SU0 546 aaPredicted RBP18.89■□□□□ 0.61
UPK3B-202ENST00000334348 MNS1Q8NEH6 495 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 RTEL1Q9NZ71 1219 aa18.89■□□□□ 0.61
UPK3B-202ENST00000334348 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 GORABQ5T7V8 394 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 TRIM65Q6PJ69 517 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 LINS1Q8NG48 757 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 LTV1Q96GA3 475 aaPredicted RBP18.88■□□□□ 0.61
UPK3B-202ENST00000334348 PHF8Q9UPP1 1060 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 DCCP43146 1447 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 ANKARQ7Z5J8 1434 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 RFX7Q2KHR2 1363 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 CCDC158Q5M9N0 1113 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 EDC3Q96F86 508 aaKnown RBP18.88■□□□□ 0.61
UPK3B-202ENST00000334348 LRRC2Q9BYS8 371 aa18.88■□□□□ 0.61
UPK3B-202ENST00000334348 PIK3C2AO00443 1686 aa18.87■□□□□ 0.61
UPK3B-202ENST00000334348 SALL1Q9NSC2 1324 aa18.87■□□□□ 0.61
UPK3B-202ENST00000334348 MYH15Q9Y2K3 1946 aa18.87■□□□□ 0.61
UPK3B-202ENST00000334348 ATP5JP18859 108 aa18.87■□□□□ 0.61
UPK3B-202ENST00000334348 DHX32Q7L7V1 743 aaKnown RBP18.87■□□□□ 0.61
UPK3B-202ENST00000334348 KDM3BQ7LBC6 1761 aa18.87■□□□□ 0.61
UPK3B-202ENST00000334348 BTBD11A6QL63 1104 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 NDUFA8P51970 172 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 RAD51AP2Q09MP3 1159 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 NCAPHQ15003 741 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 LRRFIP1Q32MZ4 808 aaKnown RBP18.86■□□□□ 0.61
UPK3B-202ENST00000334348 USHBP1Q8N6Y0 703 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 FEZ2Q9UHY8 353 aaPredicted RBP18.86■□□□□ 0.61
UPK3B-202ENST00000334348 MRC1P22897 1456 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 ABCC6O95255 1503 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 A0A1B0GVL5 298 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 POLR3GO15318 223 aaPredicted RBP18.86■□□□□ 0.61
UPK3B-202ENST00000334348 NLRP12P59046 1061 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 AGXT2Q9BYV1 514 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 SIL1Q9H173 461 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 NEDD4P46934 1319 aa18.86■□□□□ 0.61
UPK3B-202ENST00000334348 MCMDC2Q4G0Z9 681 aa18.85■□□□□ 0.61
UPK3B-202ENST00000334348 STOX1Q6ZVD7 989 aa18.85■□□□□ 0.61
UPK3B-202ENST00000334348 TOM1O60784 492 aa18.85■□□□□ 0.61
UPK3B-202ENST00000334348 PSME1Q06323 249 aa18.85■□□□□ 0.61
UPK3B-202ENST00000334348 PROSER3Q2NL68 480 aa18.85■□□□□ 0.61
UPK3B-202ENST00000334348 TMX1Q9H3N1 280 aa18.85■□□□□ 0.61
UPK3B-202ENST00000334348 ZNF609O15014 1411 aa18.85■□□□□ 0.61
UPK3B-202ENST00000334348 IKBKBO14920 756 aa18.84■□□□□ 0.61
UPK3B-202ENST00000334348 URI1O94763 535 aaPredicted RBP18.84■□□□□ 0.61
UPK3B-202ENST00000334348 FANCCQ00597 558 aa18.84■□□□□ 0.61
UPK3B-202ENST00000334348 APOBRQ0VD83 1088 aa18.84■□□□□ 0.61
UPK3B-202ENST00000334348 TEFQ10587 303 aa18.84■□□□□ 0.61
UPK3B-202ENST00000334348 CCDC129Q6ZRS4 1044 aa18.84■□□□□ 0.61
UPK3B-202ENST00000334348 LINC00301Q8NCQ3 95 aa18.84■□□□□ 0.61
UPK3B-202ENST00000334348 NEK11Q8NG66 645 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms