RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CTDNEP1O95476 244 aa22.36■■□□□ 1.17
RFTN1-201ENST00000334133 ADCY5O95622 1261 aa22.36■■□□□ 1.17
RFTN1-201ENST00000334133 NLRP10Q86W26 655 aa22.36■■□□□ 1.17
RFTN1-201ENST00000334133 TRMT112Q9UI30 125 aaKnown RBP22.36■■□□□ 1.17
RFTN1-201ENST00000334133 GIGYF2Q6Y7W6 1299 aaKnown RBP22.36■■□□□ 1.17
RFTN1-201ENST00000334133 CNNM1Q9NRU3 951 aa22.36■■□□□ 1.17
RFTN1-201ENST00000334133 ZKSCAN5Q9Y2L8 839 aa22.36■■□□□ 1.17
RFTN1-201ENST00000334133 SNAP23O00161 211 aa22.35■■□□□ 1.17
RFTN1-201ENST00000334133 CCDC39Q9UFE4 941 aa22.35■■□□□ 1.17
RFTN1-201ENST00000334133 PTPDC1A2A3K4 754 aa22.35■■□□□ 1.17
RFTN1-201ENST00000334133 FOXP2O15409 715 aa22.35■■□□□ 1.17
RFTN1-201ENST00000334133 ATP2B3Q16720 1220 aa22.35■■□□□ 1.17
RFTN1-201ENST00000334133 NSUN7Q8NE18 718 aaKnown RBP22.35■■□□□ 1.17
RFTN1-201ENST00000334133 TTLL11Q8NHH1 800 aa22.35■■□□□ 1.17
RFTN1-201ENST00000334133 FUCA2Q9BTY2 467 aa22.35■■□□□ 1.17
RFTN1-201ENST00000334133 BICD2Q8TD16 824 aa22.34■■□□□ 1.17
RFTN1-201ENST00000334133 IRS4O14654 1257 aaPredicted RBP22.34■■□□□ 1.17
RFTN1-201ENST00000334133 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
RFTN1-201ENST00000334133 EXOSC10Q01780 885 aaKnown RBP22.34■■□□□ 1.17
RFTN1-201ENST00000334133 PGBD1Q96JS3 809 aa22.34■■□□□ 1.17
RFTN1-201ENST00000334133 AKAP2Q9Y2D5 859 aa22.34■■□□□ 1.17
RFTN1-201ENST00000334133 PAPPAQ13219 1627 aa22.33■■□□□ 1.17
RFTN1-201ENST00000334133 AP5Z1O43299 807 aa22.33■■□□□ 1.17
RFTN1-201ENST00000334133 LETM1O95202 739 aaPredicted RBP22.33■■□□□ 1.17
RFTN1-201ENST00000334133 RESTQ13127 1097 aa22.33■■□□□ 1.17
RFTN1-201ENST00000334133 ABCA3Q99758 1704 aa22.33■■□□□ 1.17
RFTN1-201ENST00000334133 PFKFB2O60825 505 aa22.33■■□□□ 1.16
RFTN1-201ENST00000334133 CSF1RP07333 972 aa22.33■■□□□ 1.16
RFTN1-201ENST00000334133 HS1BP3Q53T59 392 aa22.33■■□□□ 1.16
RFTN1-201ENST00000334133 NUP62CLQ9H1M0 184 aa22.33■■□□□ 1.16
RFTN1-201ENST00000334133 DENND2AQ9ULE3 1009 aa22.33■■□□□ 1.16
RFTN1-201ENST00000334133 FGAP02671 866 aa22.32■■□□□ 1.16
RFTN1-201ENST00000334133 MCAMP43121 646 aa22.32■■□□□ 1.16
RFTN1-201ENST00000334133 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.32■■□□□ 1.16
RFTN1-201ENST00000334133 LAMA4Q16363 1823 aa22.32■■□□□ 1.16
RFTN1-201ENST00000334133 NR1I2O75469 434 aa22.32■■□□□ 1.16
RFTN1-201ENST00000334133 TRIM28Q13263 835 aaKnown RBP22.32■■□□□ 1.16
RFTN1-201ENST00000334133 OTUD7BQ6GQQ9 843 aa22.32■■□□□ 1.16
RFTN1-201ENST00000334133 ACSBG1Q96GR2 724 aa22.32■■□□□ 1.16
RFTN1-201ENST00000334133 TEX13AQ9BXU3 409 aaPredicted RBP22.32■■□□□ 1.16
RFTN1-201ENST00000334133 SCAND2PQ9GZW5 306 aaPredicted RBP22.32■■□□□ 1.16
RFTN1-201ENST00000334133 TTC12Q9H892 705 aaPredicted RBP22.32■■□□□ 1.16
RFTN1-201ENST00000334133 ADAMTS2O95450 1211 aa22.31■■□□□ 1.16
RFTN1-201ENST00000334133 HMGB1P09429 215 aaKnown RBP22.31■■□□□ 1.16
RFTN1-201ENST00000334133 RIPOR2Q9Y4F9 1068 aa22.31■■□□□ 1.16
RFTN1-201ENST00000334133 EXOC5O00471 708 aa22.31■■□□□ 1.16
RFTN1-201ENST00000334133 PDIA3P30101 505 aaKnown RBP22.31■■□□□ 1.16
RFTN1-201ENST00000334133 C17orf53Q8N3J3 647 aaPredicted RBP22.31■■□□□ 1.16
RFTN1-201ENST00000334133 R3HCC1Q9Y3T6 440 aaKnown RBP22.31■■□□□ 1.16
RFTN1-201ENST00000334133 KDM4AO75164 1064 aa22.3■■□□□ 1.16
RFTN1-201ENST00000334133 IDH1O75874 414 aaKnown RBP22.3■■□□□ 1.16
RFTN1-201ENST00000334133 CTSWP56202 376 aa22.3■■□□□ 1.16
RFTN1-201ENST00000334133 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
RFTN1-201ENST00000334133 TNMDQ9H2S6 317 aa22.3■■□□□ 1.16
RFTN1-201ENST00000334133 VSIG10Q8N0Z9 540 aa22.3■■□□□ 1.16
RFTN1-201ENST00000334133 GJB4Q9NTQ9 266 aa22.3■■□□□ 1.16
RFTN1-201ENST00000334133 ANKRD18BA2A2Z9 1011 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 MAP3K11Q16584 847 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 SMARCC2Q8TAQ2 1214 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 NKX2-3Q8TAU0 364 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 GPAA1O43292 621 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 SPC24Q8NBT2 197 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 RIC1Q4ADV7 1423 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 CCDC192P0DO97 292 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 LUZP1Q86V48 1076 aa22.29■■□□□ 1.16
RFTN1-201ENST00000334133 ELP1O95163 1332 aa22.28■■□□□ 1.16
RFTN1-201ENST00000334133 UBN2Q6ZU65 1347 aa22.28■■□□□ 1.16
RFTN1-201ENST00000334133 OFD1O75665 1012 aa22.28■■□□□ 1.16
RFTN1-201ENST00000334133 SLC9C2Q5TAH2 1124 aa22.28■■□□□ 1.16
RFTN1-201ENST00000334133 APPP05067 770 aa22.28■■□□□ 1.16
RFTN1-201ENST00000334133 PHKA1P46020 1223 aa22.28■■□□□ 1.16
RFTN1-201ENST00000334133 IMMTQ16891 758 aaKnown RBP22.27■■□□□ 1.16
RFTN1-201ENST00000334133 UVSSAQ2YD98 709 aa22.27■■□□□ 1.16
RFTN1-201ENST00000334133 A0A087WWV3 80 aa22.27■■□□□ 1.16
RFTN1-201ENST00000334133 TYRO3Q06418 890 aa22.27■■□□□ 1.16
RFTN1-201ENST00000334133 APPBP2Q92624 585 aa22.27■■□□□ 1.16
RFTN1-201ENST00000334133 PLA2G12BQ9BX93 195 aa22.27■■□□□ 1.16
RFTN1-201ENST00000334133 PIH1D3Q9NQM4 214 aaKnown RBP22.27■■□□□ 1.16
RFTN1-201ENST00000334133 MRVI1Q9Y6F6 885 aa22.26■■□□□ 1.15
RFTN1-201ENST00000334133 PRC1O43663 620 aa22.26■■□□□ 1.15
RFTN1-201ENST00000334133 BCL9O00512 1426 aa22.26■■□□□ 1.15
RFTN1-201ENST00000334133 ITGB4P16144 1822 aa22.26■■□□□ 1.15
RFTN1-201ENST00000334133 ZNF500O60304 480 aaPredicted RBP22.26■■□□□ 1.15
RFTN1-201ENST00000334133 USP28Q96RU2 1077 aa22.26■■□□□ 1.15
RFTN1-201ENST00000334133 INCENPQ9NQS7 918 aa22.26■■□□□ 1.15
RFTN1-201ENST00000334133 RXRAP19793 462 aa22.25■■□□□ 1.15
RFTN1-201ENST00000334133 ANO6Q4KMQ2 910 aa22.25■■□□□ 1.15
RFTN1-201ENST00000334133 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.25■■□□□ 1.15
RFTN1-201ENST00000334133 KLF18A0A0U1RQI7 1052 aa22.25■■□□□ 1.15
RFTN1-201ENST00000334133 AGXT2Q9BYV1 514 aa22.25■■□□□ 1.15
RFTN1-201ENST00000334133 FDPSP14324 419 aaKnown RBP22.24■■□□□ 1.15
RFTN1-201ENST00000334133 ADD1P35611 737 aaKnown RBP22.24■■□□□ 1.15
RFTN1-201ENST00000334133 SEC31BQ9NQW1 1179 aa22.24■■□□□ 1.15
RFTN1-201ENST00000334133 ERCC4Q92889 916 aaPredicted RBP22.24■■□□□ 1.15
RFTN1-201ENST00000334133 ZNF213O14771 459 aa22.23■■□□□ 1.15
RFTN1-201ENST00000334133 PDIA4P13667 645 aaKnown RBP22.23■■□□□ 1.15
RFTN1-201ENST00000334133 CCDC102BQ68D86 513 aa22.23■■□□□ 1.15
RFTN1-201ENST00000334133 STK11IPQ8N1F8 1099 aa22.23■■□□□ 1.15
RFTN1-201ENST00000334133 LLPHQ9BRT6 129 aaKnown RBP22.23■■□□□ 1.15
RFTN1-201ENST00000334133 WWC3Q9ULE0 1092 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms