RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SMIM24O75264 130 aa18.52■□□□□ 0.56
PTCH1-201ENST00000331920 JAKMIP2Q96AA8 810 aa18.52■□□□□ 0.56
PTCH1-201ENST00000331920 HARSP12081 509 aaKnown RBP18.52■□□□□ 0.56
PTCH1-201ENST00000331920 LMBR1Q8WVP7 490 aa18.52■□□□□ 0.56
PTCH1-201ENST00000331920 LZTFL1Q9NQ48 299 aa18.52■□□□□ 0.56
PTCH1-201ENST00000331920 SNRKQ9NRH2 765 aa18.52■□□□□ 0.56
PTCH1-201ENST00000331920 STMN1P16949 149 aa18.52■□□□□ 0.55
PTCH1-201ENST00000331920 INPP1P49441 399 aa18.52■□□□□ 0.55
PTCH1-201ENST00000331920 UBXN1Q04323 297 aa18.51■□□□□ 0.55
PTCH1-201ENST00000331920 ORC3Q9UBD5 711 aaPredicted RBP18.51■□□□□ 0.55
PTCH1-201ENST00000331920 RNASE9P60153 205 aaKnown RBP18.51■□□□□ 0.55
PTCH1-201ENST00000331920 IGSF3O75054 1194 aa18.51■□□□□ 0.55
PTCH1-201ENST00000331920 WAPLQ7Z5K2 1190 aa18.51■□□□□ 0.55
PTCH1-201ENST00000331920 JPH4Q96JJ6 628 aa18.51■□□□□ 0.55
PTCH1-201ENST00000331920 RABEP2Q9H5N1 569 aa18.51■□□□□ 0.55
PTCH1-201ENST00000331920 FYB2Q5VWT5 728 aa18.51■□□□□ 0.55
PTCH1-201ENST00000331920 MTRF1LQ9UGC7 380 aaKnown RBP18.51■□□□□ 0.55
PTCH1-201ENST00000331920 A0A1B0GUL7 405 aa18.51■□□□□ 0.55
PTCH1-201ENST00000331920 GNL1P36915 607 aaPredicted RBP18.51■□□□□ 0.55
PTCH1-201ENST00000331920 MARCKSP29966 332 aaPredicted RBP18.51■□□□□ 0.55
PTCH1-201ENST00000331920 TSPYL2Q9H2G4 693 aaPredicted RBP18.51■□□□□ 0.55
PTCH1-201ENST00000331920 NKIRAS1Q9NYS0 192 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 RAPGEF1Q13905 1077 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 PPP4R4Q6NUP7 873 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 PLEKHH1Q9ULM0 1364 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 NACA2Q9H009 215 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 RBM28Q9NW13 759 aaKnown RBP18.5■□□□□ 0.55
PTCH1-201ENST00000331920 MSANTD4Q8NCY6 345 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 TNPO1Q92973 898 aaKnown RBP18.5■□□□□ 0.55
PTCH1-201ENST00000331920 XAB2Q9HCS7 855 aaKnown RBP18.5■□□□□ 0.55
PTCH1-201ENST00000331920 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 FAM204AQ9H8W3 233 aa18.5■□□□□ 0.55
PTCH1-201ENST00000331920 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
PTCH1-201ENST00000331920 SYT1P21579 422 aa18.49■□□□□ 0.55
PTCH1-201ENST00000331920 NEK11Q8NG66 645 aa18.49■□□□□ 0.55
PTCH1-201ENST00000331920 ANKRD24Q8TF21 1146 aa18.49■□□□□ 0.55
PTCH1-201ENST00000331920 PPFIA2O75334 1257 aa18.49■□□□□ 0.55
PTCH1-201ENST00000331920 SKILP12757 684 aa18.49■□□□□ 0.55
PTCH1-201ENST00000331920 NBPF11Q86T75 865 aa18.49■□□□□ 0.55
PTCH1-201ENST00000331920 SLC12A5Q9H2X9 1139 aa18.49■□□□□ 0.55
PTCH1-201ENST00000331920 LMNTD2Q8IXW0 634 aa18.49■□□□□ 0.55
PTCH1-201ENST00000331920 MRPL46Q9H2W6 279 aaKnown RBP18.49■□□□□ 0.55
PTCH1-201ENST00000331920 MCUR1Q96AQ8 359 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 CASC4Q6P4E1 433 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 LEO1Q8WVC0 666 aaPredicted RBP18.48■□□□□ 0.55
PTCH1-201ENST00000331920 KRBA2Q6ZNG9 492 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 RAB3IPQ96QF0 476 aaPredicted RBP18.48■□□□□ 0.55
PTCH1-201ENST00000331920 SEL1L2Q5TEA6 688 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 CLNS1AP54105 237 aaKnown RBP18.48■□□□□ 0.55
PTCH1-201ENST00000331920 ZNF569Q5MCW4 686 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 AOPEPQ8N6M6 819 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 FAM76AQ8TAV0 307 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 PLIN2Q99541 437 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 LRRC2Q9BYS8 371 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 MAN1A1P33908 653 aa18.48■□□□□ 0.55
PTCH1-201ENST00000331920 TSHZ3Q63HK5 1081 aa18.47■□□□□ 0.55
PTCH1-201ENST00000331920 F6X3S4 739 aa18.47■□□□□ 0.55
PTCH1-201ENST00000331920 CCDC62Q6P9F0 684 aa18.47■□□□□ 0.55
PTCH1-201ENST00000331920 FAM170AA1A519 330 aa18.47■□□□□ 0.55
PTCH1-201ENST00000331920 CETN3O15182 167 aa18.47■□□□□ 0.55
PTCH1-201ENST00000331920 KRT86O43790 486 aa18.47■□□□□ 0.55
PTCH1-201ENST00000331920 NAPAP54920 295 aa18.47■□□□□ 0.55
PTCH1-201ENST00000331920 NAA16Q6N069 864 aaPredicted RBP18.47■□□□□ 0.55
PTCH1-201ENST00000331920 AFAP1L2Q8N4X5 818 aa18.47■□□□□ 0.55
PTCH1-201ENST00000331920 PSPC1Q8WXF1 523 aaKnown RBP18.47■□□□□ 0.55
PTCH1-201ENST00000331920 MX2P20592 715 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 CALCOCO2Q13137 446 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 WTAPQ15007 396 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 CFAP70Q5T0N1 1121 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 DHX58Q96C10 678 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 NCAPGQ9BPX3 1015 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 THUMPD2Q9BTF0 503 aaKnown RBP18.46■□□□□ 0.55
PTCH1-201ENST00000331920 PKD2L1Q9P0L9 805 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 IFT74Q96LB3 600 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 VCXQ9H320 206 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 C6orf50Q9HD87 102 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.46■□□□□ 0.55
PTCH1-201ENST00000331920 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
PTCH1-201ENST00000331920 UBE2HP62256 183 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 CCDC42Q96M95 316 aa18.46■□□□□ 0.55
PTCH1-201ENST00000331920 NBPF7P0C2Y1 421 aaPredicted RBP18.45■□□□□ 0.54
PTCH1-201ENST00000331920 TAF7Q15545 349 aaPredicted RBP18.45■□□□□ 0.54
PTCH1-201ENST00000331920 ZSCAN23Q3MJ62 389 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 NCOA7Q8NI08 942 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 SPDYE3A6NKU9 549 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 PSMA7O14818 248 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 RBM26Q5T8P6 1007 aaKnown RBP18.45■□□□□ 0.54
PTCH1-201ENST00000331920 GPR161Q8N6U8 529 aaKnown RBP18.45■□□□□ 0.54
PTCH1-201ENST00000331920 EP400NLQ6ZTU2 488 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 MTUS1Q9ULD2 1270 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 GTF3C6Q969F1 213 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 SETSIPP0DME0 302 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 RUFY3Q7L099 469 aa18.45■□□□□ 0.54
PTCH1-201ENST00000331920 CRNKL1Q9BZJ0 848 aaKnown RBP18.45■□□□□ 0.54
PTCH1-201ENST00000331920 VAV2P52735 878 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 ATP6V1E1P36543 226 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 VEZTQ9HBM0 779 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 STX17P56962 302 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms