RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KLRK1P26718 216 aa34.66■■■■□ 3.14
ATPAF1-201ENST00000329231 HIRAP54198 1017 aaPredicted RBP34.66■■■■□ 3.14
ATPAF1-201ENST00000329231 PGAP2Q9UHJ9 254 aa34.66■■■■□ 3.14
ATPAF1-201ENST00000329231 PLIN1O60240 522 aa34.65■■■■□ 3.14
ATPAF1-201ENST00000329231 UBTFL1P0CB47 393 aaPredicted RBP34.65■■■■□ 3.14
ATPAF1-201ENST00000329231 C15orf52Q6ZUT6 534 aaKnown RBP34.65■■■■□ 3.14
ATPAF1-201ENST00000329231 SAMD7Q7Z3H4 446 aa34.65■■■■□ 3.14
ATPAF1-201ENST00000329231 HDAC5Q9UQL6 1122 aa34.65■■■■□ 3.14
ATPAF1-201ENST00000329231 TMEM88BA6NKF7 163 aa34.64■■■■□ 3.14
ATPAF1-201ENST00000329231 BCAR3O75815 825 aa34.64■■■■□ 3.14
ATPAF1-201ENST00000329231 SNAP23O00161 211 aa34.63■■■■□ 3.13
ATPAF1-201ENST00000329231 PUS3Q9BZE2 481 aaKnown RBP34.63■■■■□ 3.13
ATPAF1-201ENST00000329231 TBC1D10BQ4KMP7 808 aaPredicted RBP34.62■■■■□ 3.13
ATPAF1-201ENST00000329231 STRIP1Q5VSL9 837 aa34.62■■■■□ 3.13
ATPAF1-201ENST00000329231 INTS3Q68E01 1043 aaKnown RBP34.62■■■■□ 3.13
ATPAF1-201ENST00000329231 FRAT1Q92837 279 aaPredicted RBP34.62■■■■□ 3.13
ATPAF1-201ENST00000329231 RIPOR2Q9Y4F9 1068 aa34.62■■■■□ 3.13
ATPAF1-201ENST00000329231 MROH5Q6ZUA9 1318 aa34.61■■■■□ 3.13
ATPAF1-201ENST00000329231 PSME4Q14997 1843 aa34.61■■■■□ 3.13
ATPAF1-201ENST00000329231 ATF7IPQ6VMQ6 1270 aa34.61■■■■□ 3.13
ATPAF1-201ENST00000329231 FBXW7Q969H0 707 aa34.61■■■■□ 3.13
ATPAF1-201ENST00000329231 GMLQ99445 158 aa34.61■■■■□ 3.13
ATPAF1-201ENST00000329231 IRS2Q9Y4H2 1338 aa34.6■■■■□ 3.13
ATPAF1-201ENST00000329231 RBM26Q5T8P6 1007 aaKnown RBP34.6■■■■□ 3.13
ATPAF1-201ENST00000329231 ZNF804AQ7Z570 1209 aa34.6■■■■□ 3.13
ATPAF1-201ENST00000329231 CD209Q9NNX6 404 aa34.6■■■■□ 3.13
ATPAF1-201ENST00000329231 USP17L8P0C7I0 530 aa34.59■■■■□ 3.13
ATPAF1-201ENST00000329231 TRIM27P14373 513 aa34.59■■■■□ 3.13
ATPAF1-201ENST00000329231 ZNF280AP59817 542 aaPredicted RBP34.59■■■■□ 3.13
ATPAF1-201ENST00000329231 UBE4AQ14139 1066 aa34.59■■■■□ 3.13
ATPAF1-201ENST00000329231 KIF4BQ2VIQ3 1234 aa34.59■■■■□ 3.13
ATPAF1-201ENST00000329231 DACT2Q5SW24 774 aa34.59■■■■□ 3.13
ATPAF1-201ENST00000329231 TTLL5Q6EMB2 1281 aa34.59■■■■□ 3.13
ATPAF1-201ENST00000329231 MYO3BQ8WXR4 1341 aa34.58■■■■□ 3.13
ATPAF1-201ENST00000329231 EGFRP00533 1210 aa34.58■■■■□ 3.13
ATPAF1-201ENST00000329231 A0A1B0GUL6 1792 aa34.58■■■■□ 3.13
ATPAF1-201ENST00000329231 CDC37L1Q7L3B6 337 aa34.57■■■■□ 3.12
ATPAF1-201ENST00000329231 TRAF5O00463 557 aa34.56■■■■□ 3.12
ATPAF1-201ENST00000329231 LRRC24Q50LG9 513 aa34.56■■■■□ 3.12
ATPAF1-201ENST00000329231 JMYQ8N9B5 988 aa34.56■■■■□ 3.12
ATPAF1-201ENST00000329231 METTL24Q5JXM2 366 aa34.55■■■■□ 3.12
ATPAF1-201ENST00000329231 KLHDC4Q8TBB5 520 aa34.55■■■■□ 3.12
ATPAF1-201ENST00000329231 MEIS3Q99687 375 aa34.55■■■■□ 3.12
ATPAF1-201ENST00000329231 GLIS2Q9BZE0 524 aaPredicted RBP34.55■■■■□ 3.12
ATPAF1-201ENST00000329231 LRRFIP2Q9Y608 721 aaKnown RBP34.55■■■■□ 3.12
ATPAF1-201ENST00000329231 GNAI3P08754 354 aa34.54■■■■□ 3.12
ATPAF1-201ENST00000329231 GTF2IP78347 998 aa34.54■■■■□ 3.12
ATPAF1-201ENST00000329231 ZKSCAN2Q63HK3 967 aa34.54■■■■□ 3.12
ATPAF1-201ENST00000329231 IL1R1P14778 569 aa34.53■■■■□ 3.12
ATPAF1-201ENST00000329231 RFX5P48382 616 aaPredicted RBP34.53■■■■□ 3.12
ATPAF1-201ENST00000329231 FMR1Q06787 632 aaKnown RBP eCLIP34.53■■■■□ 3.12
ATPAF1-201ENST00000329231 OGFOD1Q8N543 542 aa34.53■■■■□ 3.12
ATPAF1-201ENST00000329231 MXD3Q9BW11 206 aa34.53■■■■□ 3.12
ATPAF1-201ENST00000329231 MYOZ2Q9NPC6 264 aa34.53■■■■□ 3.12
ATPAF1-201ENST00000329231 MKRN1Q9UHC7 482 aaKnown RBP34.53■■■■□ 3.12
ATPAF1-201ENST00000329231 MMP14P50281 582 aa34.52■■■■□ 3.12
ATPAF1-201ENST00000329231 CLUAP1Q96AJ1 413 aa34.52■■■■□ 3.12
ATPAF1-201ENST00000329231 DCPSQ96C86 337 aaKnown RBP34.52■■■■□ 3.12
ATPAF1-201ENST00000329231 CNTNAP1P78357 1384 aa34.5■■■■□ 3.11
ATPAF1-201ENST00000329231 PTPN12Q05209 780 aaKnown RBP34.5■■■■□ 3.11
ATPAF1-201ENST00000329231 ABT1Q9ULW3 272 aaKnown RBP34.5■■■■□ 3.11
ATPAF1-201ENST00000329231 TNNQ9UQP3 1299 aa34.5■■■■□ 3.11
ATPAF1-201ENST00000329231 EYA2O00167 538 aa34.49■■■■□ 3.11
ATPAF1-201ENST00000329231 PDE8BO95263 885 aa34.49■■■■□ 3.11
ATPAF1-201ENST00000329231 KRT26Q7Z3Y9 468 aa34.49■■■■□ 3.11
ATPAF1-201ENST00000329231 USP48Q86UV5 1035 aa34.49■■■■□ 3.11
ATPAF1-201ENST00000329231 HIBADHP31937 336 aaKnown RBP34.48■■■■□ 3.11
ATPAF1-201ENST00000329231 SCARF1Q14162 830 aa34.48■■■■□ 3.11
ATPAF1-201ENST00000329231 CST9Q5W186 159 aa34.48■■■■□ 3.11
ATPAF1-201ENST00000329231 VGLL2Q8N8G2 317 aa34.48■■■■□ 3.11
ATPAF1-201ENST00000329231 FBXO3Q9UK99 471 aa34.48■■■■□ 3.11
ATPAF1-201ENST00000329231 CELF2O95319 508 aaKnown RBP34.47■■■■□ 3.11
ATPAF1-201ENST00000329231 FAM84BQ96KN1 310 aaPredicted RBP34.47■■■■□ 3.11
ATPAF1-201ENST00000329231 GGA3Q9NZ52 723 aa34.47■■■■□ 3.11
ATPAF1-201ENST00000329231 HDAC9Q9UKV0 1011 aa34.47■■■■□ 3.11
ATPAF1-201ENST00000329231 RASSF10A6NK89 507 aa34.46■■■■□ 3.11
ATPAF1-201ENST00000329231 GYG1P46976 350 aa34.46■■■■□ 3.11
ATPAF1-201ENST00000329231 ZNF646O15015 1829 aaPredicted RBP34.46■■■■□ 3.11
ATPAF1-201ENST00000329231 SASH1O94885 1247 aa34.45■■■■□ 3.11
ATPAF1-201ENST00000329231 DEFB115Q30KQ5 88 aa34.45■■■■□ 3.11
ATPAF1-201ENST00000329231 KIAA0825Q8IV33 1275 aa34.45■■■■□ 3.11
ATPAF1-201ENST00000329231 SULF1Q8IWU6 871 aa34.45■■■■□ 3.11
ATPAF1-201ENST00000329231 TRPM7Q96QT4 1865 aa34.45■■■■□ 3.11
ATPAF1-201ENST00000329231 FKBP1AP62942 108 aaKnown RBP34.44■■■■□ 3.1
ATPAF1-201ENST00000329231 VPS37DQ86XT2 251 aa34.44■■■■□ 3.1
ATPAF1-201ENST00000329231 TDRD7Q8NHU6 1098 aaKnown RBP34.44■■■■□ 3.1
ATPAF1-201ENST00000329231 CIAO1O76071 339 aa34.43■■■■□ 3.1
ATPAF1-201ENST00000329231 PUM3Q15397 648 aaKnown RBP34.43■■■■□ 3.1
ATPAF1-201ENST00000329231 CAVIN4Q5BKX8 364 aa34.43■■■■□ 3.1
ATPAF1-201ENST00000329231 ANGEL2Q5VTE6 544 aaKnown RBP34.43■■■■□ 3.1
ATPAF1-201ENST00000329231 FTSJ3Q8IY81 847 aaKnown RBP34.43■■■■□ 3.1
ATPAF1-201ENST00000329231 TMEM57Q8N5G2 664 aa34.43■■■■□ 3.1
ATPAF1-201ENST00000329231 ZNF408Q9H9D4 720 aa34.43■■■■□ 3.1
ATPAF1-201ENST00000329231 ASTN2O75129 1339 aaPredicted RBP34.43■■■■□ 3.1
ATPAF1-201ENST00000329231 ATG9AQ7Z3C6 839 aa34.42■■■■□ 3.1
ATPAF1-201ENST00000329231 FBXO33Q7Z6M2 555 aa34.42■■■■□ 3.1
ATPAF1-201ENST00000329231 SIL1Q9H173 461 aa34.42■■■■□ 3.1
ATPAF1-201ENST00000329231 GNAI2P04899 355 aa34.41■■■■□ 3.1
ATPAF1-201ENST00000329231 IFIT1P09914 478 aaKnown RBP34.41■■■■□ 3.1
ATPAF1-201ENST00000329231 CERS5Q8N5B7 392 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms