RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZBTB22O15209 634 aa21.4■■□□□ 1.02
RAB39A-201ENST00000320578 TM4SF1P30408 202 aa21.4■■□□□ 1.02
RAB39A-201ENST00000320578 KCNJ4P48050 445 aa21.4■■□□□ 1.02
RAB39A-201ENST00000320578 RPS8P62241 208 aaKnown RBP21.4■■□□□ 1.02
RAB39A-201ENST00000320578 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.4■■□□□ 1.02
RAB39A-201ENST00000320578 ZSWIM6Q9HCJ5 1215 aa21.4■■□□□ 1.02
RAB39A-201ENST00000320578 SLC27A2O14975 620 aa21.39■■□□□ 1.02
RAB39A-201ENST00000320578 PSMA5P28066 241 aa21.39■■□□□ 1.02
RAB39A-201ENST00000320578 PHKA1P46020 1223 aa21.39■■□□□ 1.02
RAB39A-201ENST00000320578 TTC14Q96N46 770 aa21.39■■□□□ 1.02
RAB39A-201ENST00000320578 CUL4AQ13619 759 aa21.39■■□□□ 1.01
RAB39A-201ENST00000320578 KRT32Q14532 448 aa21.39■■□□□ 1.01
RAB39A-201ENST00000320578 NFKBIBQ15653 356 aa21.39■■□□□ 1.01
RAB39A-201ENST00000320578 SPRYD3Q8NCJ5 442 aa21.39■■□□□ 1.01
RAB39A-201ENST00000320578 MINPP1Q9UNW1 487 aa21.39■■□□□ 1.01
RAB39A-201ENST00000320578 CNBD1Q8NA66 436 aa21.38■■□□□ 1.01
RAB39A-201ENST00000320578 APPBP2Q92624 585 aa21.38■■□□□ 1.01
RAB39A-201ENST00000320578 AKAP11Q9UKA4 1901 aa21.38■■□□□ 1.01
RAB39A-201ENST00000320578 RPAP1Q9BWH6 1393 aaPredicted RBP21.37■■□□□ 1.01
RAB39A-201ENST00000320578 VPS53Q5VIR6 699 aa21.37■■□□□ 1.01
RAB39A-201ENST00000320578 FLAD1Q8NFF5 587 aa21.37■■□□□ 1.01
RAB39A-201ENST00000320578 CELF1Q92879 486 aaKnown RBP21.37■■□□□ 1.01
RAB39A-201ENST00000320578 INTS4Q96HW7 963 aaKnown RBP21.37■■□□□ 1.01
RAB39A-201ENST00000320578 TMX3Q96JJ7 454 aa21.37■■□□□ 1.01
RAB39A-201ENST00000320578 SEC62Q99442 399 aaKnown RBP21.37■■□□□ 1.01
RAB39A-201ENST00000320578 ANKRD2Q9GZV1 360 aa21.37■■□□□ 1.01
RAB39A-201ENST00000320578 ALDH8A1Q9H2A2 487 aaPredicted RBP21.37■■□□□ 1.01
RAB39A-201ENST00000320578 APBA3O96018 575 aa21.36■■□□□ 1.01
RAB39A-201ENST00000320578 CYP2E1P05181 493 aaPredicted RBP21.36■■□□□ 1.01
RAB39A-201ENST00000320578 UBE3CQ15386 1083 aa21.36■■□□□ 1.01
RAB39A-201ENST00000320578 AKT1S1Q96B36 256 aa21.36■■□□□ 1.01
RAB39A-201ENST00000320578 UPF3BQ9BZI7 483 aaKnown RBP21.36■■□□□ 1.01
RAB39A-201ENST00000320578 ZNF804BA4D1E1 1349 aa21.36■■□□□ 1.01
RAB39A-201ENST00000320578 MAST3O60307 1309 aa21.36■■□□□ 1.01
RAB39A-201ENST00000320578 SPATA5Q8NB90 893 aa21.36■■□□□ 1.01
RAB39A-201ENST00000320578 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
RAB39A-201ENST00000320578 CASTP20810 708 aaKnown RBP21.34■■□□□ 1.01
RAB39A-201ENST00000320578 ADD2P35612 726 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 PRR5LQ6MZQ0 368 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 RUFY3Q7L099 469 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 OSBP2Q969R2 916 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 JAKMIP1Q96N16 626 aaKnown RBP21.34■■□□□ 1.01
RAB39A-201ENST00000320578 RGS17Q9UGC6 210 aaPredicted RBP21.34■■□□□ 1.01
RAB39A-201ENST00000320578 CASZ1Q86V15 1759 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 COL4A1P02462 1669 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 RGPD3A6NKT7 1758 aaPredicted RBP21.34■■□□□ 1.01
RAB39A-201ENST00000320578 RGPD4Q7Z3J3 1758 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 NPHP1O15259 732 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 CHGBP05060 677 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 PI16Q6UXB8 463 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 CCDC129Q6ZRS4 1044 aa21.34■■□□□ 1.01
RAB39A-201ENST00000320578 GNL3LQ9NVN8 582 aaKnown RBP21.34■■□□□ 1.01
RAB39A-201ENST00000320578 SERPINB2P05120 415 aa21.33■■□□□ 1.01
RAB39A-201ENST00000320578 ST5P78524 1137 aa21.33■■□□□ 1.01
RAB39A-201ENST00000320578 RASGRF1Q13972 1273 aa21.33■■□□□ 1.01
RAB39A-201ENST00000320578 NBR1Q14596 966 aa21.33■■□□□ 1.01
RAB39A-201ENST00000320578 ADCK5Q3MIX3 580 aa21.33■■□□□ 1.01
RAB39A-201ENST00000320578 CRY2Q49AN0 593 aa21.33■■□□□ 1.01
RAB39A-201ENST00000320578 FBXO41Q8TF61 875 aa21.33■■□□□ 1.01
RAB39A-201ENST00000320578 HSPD1P10809 573 aaKnown RBP21.32■■□□□ 1
RAB39A-201ENST00000320578 GRAPQ13588 217 aa21.32■■□□□ 1
RAB39A-201ENST00000320578 RAB3GAP1Q15042 981 aa21.32■■□□□ 1
RAB39A-201ENST00000320578 GRAPLQ8TC17 118 aaPredicted RBP21.32■■□□□ 1
RAB39A-201ENST00000320578 PIH1D3Q9NQM4 214 aaKnown RBP21.32■■□□□ 1
RAB39A-201ENST00000320578 LIMCH1Q9UPQ0 1083 aa21.32■■□□□ 1
RAB39A-201ENST00000320578 A0A1B0GUL6 1792 aa21.32■■□□□ 1
RAB39A-201ENST00000320578 M0R2C6 588 aa21.32■■□□□ 1
RAB39A-201ENST00000320578 SEMA3EO15041 775 aa21.32■■□□□ 1
RAB39A-201ENST00000320578 ZSCAN31Q96LW9 406 aaPredicted RBP21.32■■□□□ 1
RAB39A-201ENST00000320578 PDRG1Q9NUG6 133 aa21.32■■□□□ 1
RAB39A-201ENST00000320578 CTNNA3Q9UI47 895 aa21.32■■□□□ 1
RAB39A-201ENST00000320578 PDS5AQ29RF7 1337 aaKnown RBP21.31■■□□□ 1
RAB39A-201ENST00000320578 SNAP23O00161 211 aa21.31■■□□□ 1
RAB39A-201ENST00000320578 BCAMP50895 628 aa21.31■■□□□ 1
RAB39A-201ENST00000320578 NUCB2P80303 420 aa21.31■■□□□ 1
RAB39A-201ENST00000320578 WASHC4Q2M389 1173 aa21.31■■□□□ 1
RAB39A-201ENST00000320578 CAVIN4Q5BKX8 364 aa21.31■■□□□ 1
RAB39A-201ENST00000320578 NLGN1Q8N2Q7 840 aa21.31■■□□□ 1
RAB39A-201ENST00000320578 KLRG2A4D1S0 409 aaPredicted RBP21.3■■□□□ 1
RAB39A-201ENST00000320578 AK2P54819 239 aa21.3■■□□□ 1
RAB39A-201ENST00000320578 MAP3K12Q12852 859 aa21.3■■□□□ 1
RAB39A-201ENST00000320578 ANKRD1Q15327 319 aa21.3■■□□□ 1
RAB39A-201ENST00000320578 SLC9C2Q5TAH2 1124 aa21.3■■□□□ 1
RAB39A-201ENST00000320578 TFCP2L1Q9NZI6 479 aa21.3■■□□□ 1
RAB39A-201ENST00000320578 TNRC6CQ9HCJ0 1690 aaKnown RBP21.3■■□□□ 1
RAB39A-201ENST00000320578 POLRMTO00411 1230 aaKnown RBP21.29■■□□□ 1
RAB39A-201ENST00000320578 CYP21A2P08686 494 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 ZNF827Q17R98 1081 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 BLOC1S2Q6QNY1 142 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 FBXO33Q7Z6M2 555 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 TCRBV5S4A2TA0A5A2 114 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 IGSF3O75054 1194 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 HMGB1P09429 215 aaKnown RBP21.29■■□□□ 1
RAB39A-201ENST00000320578 PDE6AP16499 860 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 RPS6KB1P23443 525 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 SLFNL1Q499Z3 407 aa21.29■■□□□ 1
RAB39A-201ENST00000320578 SH2B1Q9NRF2 756 aaPredicted RBP21.29■■□□□ 1
RAB39A-201ENST00000320578 MYH7P12883 1935 aa21.28■■□□□ 1
RAB39A-201ENST00000320578 HOXA10P31260 410 aaPredicted RBP21.28■■□□□ 1
RAB39A-201ENST00000320578 POTEAQ6S8J7 498 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms