RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 PHRF1Q9P1Y6 1649 aaKnown RBP17.46■□□□□ 0.39
TFE3-201ENST00000315869 ELP1O95163 1332 aa17.46■□□□□ 0.38
TFE3-201ENST00000315869 FKBP4Q02790 459 aaKnown RBP eCLIP17.46■□□□□ 0.38
TFE3-201ENST00000315869 SCRN1Q12765 414 aa17.46■□□□□ 0.38
TFE3-201ENST00000315869 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
TFE3-201ENST00000315869 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
TFE3-201ENST00000315869 PTPDC1A2A3K4 754 aa17.45■□□□□ 0.38
TFE3-201ENST00000315869 WASHC4Q2M389 1173 aa17.45■□□□□ 0.38
TFE3-201ENST00000315869 NCAPD2Q15021 1401 aa17.45■□□□□ 0.38
TFE3-201ENST00000315869 BIN1O00499 593 aa17.45■□□□□ 0.38
TFE3-201ENST00000315869 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
TFE3-201ENST00000315869 C11orf57Q6ZUT1 292 aaPredicted RBP17.45■□□□□ 0.38
TFE3-201ENST00000315869 SMAP1Q8IYB5 467 aaPredicted RBP17.45■□□□□ 0.38
TFE3-201ENST00000315869 COL5A2P05997 1499 aaPredicted RBP17.45■□□□□ 0.38
TFE3-201ENST00000315869 CPDO75976 1380 aa17.45■□□□□ 0.38
TFE3-201ENST00000315869 PDIA4P13667 645 aaKnown RBP17.44■□□□□ 0.38
TFE3-201ENST00000315869 KCNB2Q92953 911 aa17.44■□□□□ 0.38
TFE3-201ENST00000315869 CARD10Q9BWT7 1032 aa17.44■□□□□ 0.38
TFE3-201ENST00000315869 TMOD3Q9NYL9 352 aa17.44■□□□□ 0.38
TFE3-201ENST00000315869 ISM2Q6H9L7 571 aa17.44■□□□□ 0.38
TFE3-201ENST00000315869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.38
TFE3-201ENST00000315869 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
TFE3-201ENST00000315869 CCDC144BQ3MJ40 725 aa17.44■□□□□ 0.38
TFE3-201ENST00000315869 CCDC144CPQ8IYA2 1237 aa17.44■□□□□ 0.38
TFE3-201ENST00000315869 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
TFE3-201ENST00000315869 METTL22Q9BUU2 404 aaPredicted RBP17.44■□□□□ 0.38
TFE3-201ENST00000315869 DNAJC10Q8IXB1 793 aa17.43■□□□□ 0.38
TFE3-201ENST00000315869 SMC2O95347 1197 aa17.43■□□□□ 0.38
TFE3-201ENST00000315869 ATP5JP18859 108 aa17.43■□□□□ 0.38
TFE3-201ENST00000315869 RESTQ13127 1097 aa17.43■□□□□ 0.38
TFE3-201ENST00000315869 HSP90AB3PQ58FF7 597 aa17.43■□□□□ 0.38
TFE3-201ENST00000315869 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
TFE3-201ENST00000315869 SKILP12757 684 aa17.43■□□□□ 0.38
TFE3-201ENST00000315869 AOPEPQ8N6M6 819 aa17.43■□□□□ 0.38
TFE3-201ENST00000315869 ZSCAN16Q9H4T2 348 aaPredicted RBP17.43■□□□□ 0.38
TFE3-201ENST00000315869 PTPN12Q05209 780 aaKnown RBP17.42■□□□□ 0.38
TFE3-201ENST00000315869 STK38Q15208 465 aa17.42■□□□□ 0.38
TFE3-201ENST00000315869 COL18A1P39060 1754 aa17.42■□□□□ 0.38
TFE3-201ENST00000315869 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
TFE3-201ENST00000315869 PIGBQ92521 554 aa17.42■□□□□ 0.38
TFE3-201ENST00000315869 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 CPLX1O14810 134 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 STX1AQ16623 288 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 TTLL5Q6EMB2 1281 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 DHX32Q7L7V1 743 aaKnown RBP17.41■□□□□ 0.38
TFE3-201ENST00000315869 ZNF594Q96JF6 807 aaPredicted RBP17.41■□□□□ 0.38
TFE3-201ENST00000315869 ZNF396Q96N95 335 aaPredicted RBP17.41■□□□□ 0.38
TFE3-201ENST00000315869 GPTP24298 496 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 CEP135Q66GS9 1140 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 TDRD7Q8NHU6 1098 aaKnown RBP17.41■□□□□ 0.38
TFE3-201ENST00000315869 KDM3BQ7LBC6 1761 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 PTPN14Q15678 1187 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 CEP57L1Q8IYX8 460 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 OVOS2A0A0G2JMS6 1433 aa17.41■□□□□ 0.38
TFE3-201ENST00000315869 KCNQ4P56696 695 aa17.4■□□□□ 0.38
TFE3-201ENST00000315869 STOX1Q6ZVD7 989 aa17.4■□□□□ 0.38
TFE3-201ENST00000315869 SYNE4Q8N205 404 aa17.4■□□□□ 0.38
TFE3-201ENST00000315869 GPHNQ9NQX3 736 aaPredicted RBP17.4■□□□□ 0.38
TFE3-201ENST00000315869 IFIT1P09914 478 aaKnown RBP17.4■□□□□ 0.38
TFE3-201ENST00000315869 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.38
TFE3-201ENST00000315869 CCDC69A6NI79 296 aa17.4■□□□□ 0.38
TFE3-201ENST00000315869 PAG1Q9NWQ8 432 aa17.4■□□□□ 0.38
TFE3-201ENST00000315869 CACNA1FO60840 1977 aa17.39■□□□□ 0.38
TFE3-201ENST00000315869 MED23Q9ULK4 1368 aa17.39■□□□□ 0.38
TFE3-201ENST00000315869 GNL2Q13823 731 aaKnown RBP17.39■□□□□ 0.37
TFE3-201ENST00000315869 ZNF771Q7L3S4 317 aaPredicted RBP17.39■□□□□ 0.37
TFE3-201ENST00000315869 ANO10Q9NW15 660 aa17.39■□□□□ 0.37
TFE3-201ENST00000315869 TAF7LQ5H9L4 462 aa17.39■□□□□ 0.37
TFE3-201ENST00000315869 NSUN7Q8NE18 718 aaKnown RBP17.39■□□□□ 0.37
TFE3-201ENST00000315869 COPRSQ9NQ92 184 aa17.39■□□□□ 0.37
TFE3-201ENST00000315869 KBTBD3Q8NAB2 608 aa17.38■□□□□ 0.37
TFE3-201ENST00000315869 GOLPH3LQ9H4A5 285 aa17.38■□□□□ 0.37
TFE3-201ENST00000315869 USP27XA6NNY8 438 aa17.38■□□□□ 0.37
TFE3-201ENST00000315869 SMTNL1A8MU46 457 aa17.38■□□□□ 0.37
TFE3-201ENST00000315869 FAM182BQ5T319 152 aa17.38■□□□□ 0.37
TFE3-201ENST00000315869 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
TFE3-201ENST00000315869 PLA2G4DQ86XP0 818 aa17.38■□□□□ 0.37
TFE3-201ENST00000315869 SRCAPQ6ZRS2 3230 aa17.38■□□□□ 0.37
TFE3-201ENST00000315869 SYNE3Q6ZMZ3 975 aa17.37■□□□□ 0.37
TFE3-201ENST00000315869 STK11IPQ8N1F8 1099 aa17.37■□□□□ 0.37
TFE3-201ENST00000315869 GJB4Q9NTQ9 266 aa17.37■□□□□ 0.37
TFE3-201ENST00000315869 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
TFE3-201ENST00000315869 ZNF609O15014 1411 aa17.37■□□□□ 0.37
TFE3-201ENST00000315869 NCBP1Q09161 790 aaKnown RBP17.37■□□□□ 0.37
TFE3-201ENST00000315869 COL15A1P39059 1388 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 LRRC8AQ8IWT6 810 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 HAUS7Q99871 368 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 NAT10Q9H0A0 1025 aaKnown RBP17.36■□□□□ 0.37
TFE3-201ENST00000315869 E7EWF7 191 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 EXOC5O00471 708 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 CTAGE5O15320 804 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 APPP05067 770 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
TFE3-201ENST00000315869 HOMER1Q86YM7 354 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 C8orf76Q96K31 380 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 PRDM4Q9UKN5 801 aa17.36■□□□□ 0.37
TFE3-201ENST00000315869 PFKFB2O60825 505 aa17.35■□□□□ 0.37
TFE3-201ENST00000315869 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.35■□□□□ 0.37
TFE3-201ENST00000315869 RALYLQ86SE5 291 aaKnown RBP17.35■□□□□ 0.37
TFE3-201ENST00000315869 FAM160A1Q05DH4 1040 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms