RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ARAP2Q8WZ64 1704 aa27.24■■□□□ 1.95
IRF3-201ENST00000309877 NPR1P16066 1061 aa27.24■■□□□ 1.95
IRF3-201ENST00000309877 BCAMP50895 628 aa27.24■■□□□ 1.95
IRF3-201ENST00000309877 CAVIN4Q5BKX8 364 aa27.24■■□□□ 1.95
IRF3-201ENST00000309877 TICAM2Q86XR7 235 aa27.24■■□□□ 1.95
IRF3-201ENST00000309877 SRGNP10124 158 aa27.23■■□□□ 1.95
IRF3-201ENST00000309877 KIAA1211Q6ZU35 1233 aa27.23■■□□□ 1.95
IRF3-201ENST00000309877 ANTXR1Q9H6X2 564 aa27.23■■□□□ 1.95
IRF3-201ENST00000309877 LRRFIP1Q32MZ4 808 aaKnown RBP27.22■■□□□ 1.95
IRF3-201ENST00000309877 FAM227BQ96M60 508 aa27.22■■□□□ 1.95
IRF3-201ENST00000309877 IL25Q9H293 177 aa27.22■■□□□ 1.95
IRF3-201ENST00000309877 GNL3LQ9NVN8 582 aaKnown RBP27.22■■□□□ 1.95
IRF3-201ENST00000309877 ZNF804BA4D1E1 1349 aa27.22■■□□□ 1.95
IRF3-201ENST00000309877 PI16Q6UXB8 463 aa27.21■■□□□ 1.95
IRF3-201ENST00000309877 TMC4Q7Z404 712 aa27.21■■□□□ 1.95
IRF3-201ENST00000309877 VPS37DQ86XT2 251 aa27.21■■□□□ 1.95
IRF3-201ENST00000309877 RAD50Q92878 1312 aa27.21■■□□□ 1.95
IRF3-201ENST00000309877 WTIPA6NIX2 430 aaPredicted RBP27.21■■□□□ 1.95
IRF3-201ENST00000309877 ALDH1B1P30837 517 aa27.21■■□□□ 1.95
IRF3-201ENST00000309877 TTF1Q15361 905 aaPredicted RBP27.21■■□□□ 1.95
IRF3-201ENST00000309877 IPO9Q96P70 1041 aaKnown RBP27.21■■□□□ 1.95
IRF3-201ENST00000309877 LEMD3Q9Y2U8 911 aa27.21■■□□□ 1.95
IRF3-201ENST00000309877 XDHP47989 1333 aa27.2■■□□□ 1.95
IRF3-201ENST00000309877 ANKRD31Q8N7Z5 1873 aa27.2■■□□□ 1.94
IRF3-201ENST00000309877 GYG1P46976 350 aa27.2■■□□□ 1.94
IRF3-201ENST00000309877 SPATA5Q8NB90 893 aa27.2■■□□□ 1.94
IRF3-201ENST00000309877 MASTLQ96GX5 879 aa27.2■■□□□ 1.94
IRF3-201ENST00000309877 HMG20BQ9P0W2 317 aa27.2■■□□□ 1.94
IRF3-201ENST00000309877 A0A1B0GUL6 1792 aa27.2■■□□□ 1.94
IRF3-201ENST00000309877 A0A0D9SFI3 127 aa27.19■■□□□ 1.94
IRF3-201ENST00000309877 EPB41L2O43491 1005 aaKnown RBP27.19■■□□□ 1.94
IRF3-201ENST00000309877 MCCP23508 829 aa27.19■■□□□ 1.94
IRF3-201ENST00000309877 UPF1Q92900 1129 aaKnown RBP eCLIP27.19■■□□□ 1.94
IRF3-201ENST00000309877 PPEF1O14829 653 aaPredicted RBP27.18■■□□□ 1.94
IRF3-201ENST00000309877 RASGRF1Q13972 1273 aa27.18■■□□□ 1.94
IRF3-201ENST00000309877 C2CD5Q86YS7 1000 aa27.18■■□□□ 1.94
IRF3-201ENST00000309877 H0YIN7 160 aa27.17■■□□□ 1.94
IRF3-201ENST00000309877 FAM84BQ96KN1 310 aaPredicted RBP27.17■■□□□ 1.94
IRF3-201ENST00000309877 RNF113AO15541 343 aaKnown RBP27.17■■□□□ 1.94
IRF3-201ENST00000309877 CYP2E1P05181 493 aaPredicted RBP27.17■■□□□ 1.94
IRF3-201ENST00000309877 NSFL1CQ9UNZ2 370 aaKnown RBP27.17■■□□□ 1.94
IRF3-201ENST00000309877 GPSM2P81274 684 aa27.16■■□□□ 1.94
IRF3-201ENST00000309877 SP8Q8IXZ3 490 aa27.16■■□□□ 1.94
IRF3-201ENST00000309877 ZNF622Q969S3 477 aaKnown RBP eCLIP27.16■■□□□ 1.94
IRF3-201ENST00000309877 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.16■■□□□ 1.942e-6■■■■□ 21.1
IRF3-201ENST00000309877 LSG1Q9H089 658 aaKnown RBP27.16■■□□□ 1.94
IRF3-201ENST00000309877 ZFYP08048 801 aaPredicted RBP27.15■■□□□ 1.94
IRF3-201ENST00000309877 FBXO33Q7Z6M2 555 aa27.15■■□□□ 1.94
IRF3-201ENST00000309877 ATP2B4P23634 1241 aa27.14■■□□□ 1.94
IRF3-201ENST00000309877 KLRK1P26718 216 aa27.14■■□□□ 1.94
IRF3-201ENST00000309877 HIBADHP31937 336 aaKnown RBP27.14■■□□□ 1.94
IRF3-201ENST00000309877 MCMDC2Q4G0Z9 681 aa27.14■■□□□ 1.94
IRF3-201ENST00000309877 ZSCAN25Q6NSZ9 544 aa27.14■■□□□ 1.94
IRF3-201ENST00000309877 SLC51AQ86UW1 340 aa27.14■■□□□ 1.94
IRF3-201ENST00000309877 HELLSQ9NRZ9 838 aa27.14■■□□□ 1.94
IRF3-201ENST00000309877 GGA1Q9UJY5 639 aa27.14■■□□□ 1.94
IRF3-201ENST00000309877 CHGBP05060 677 aa27.14■■□□□ 1.93
IRF3-201ENST00000309877 TMX4Q9H1E5 349 aaPredicted RBP27.14■■□□□ 1.93
IRF3-201ENST00000309877 PIH1D3Q9NQM4 214 aaKnown RBP27.14■■□□□ 1.93
IRF3-201ENST00000309877 ATP6V0A2Q9Y487 856 aa27.14■■□□□ 1.93
IRF3-201ENST00000309877 ZMYM1Q5SVZ6 1142 aa27.13■■□□□ 1.93
IRF3-201ENST00000309877 STYK1Q6J9G0 422 aa27.13■■□□□ 1.93
IRF3-201ENST00000309877 IQSEC3Q9UPP2 1182 aaPredicted RBP27.13■■□□□ 1.93
IRF3-201ENST00000309877 MED23Q9ULK4 1368 aa27.13■■□□□ 1.93
IRF3-201ENST00000309877 AKAP11Q9UKA4 1901 aa27.12■■□□□ 1.93
IRF3-201ENST00000309877 FRAT2O75474 233 aaPredicted RBP27.12■■□□□ 1.93
IRF3-201ENST00000309877 IDH1O75874 414 aaKnown RBP27.12■■□□□ 1.93
IRF3-201ENST00000309877 UFL1O94874 794 aa27.12■■□□□ 1.93
IRF3-201ENST00000309877 PODXL2Q9NZ53 605 aa27.12■■□□□ 1.93
IRF3-201ENST00000309877 DENND2AQ9ULE3 1009 aa27.12■■□□□ 1.93
IRF3-201ENST00000309877 SEMA3EO15041 775 aa27.11■■□□□ 1.93
IRF3-201ENST00000309877 KIF2CQ99661 725 aa27.11■■□□□ 1.93
IRF3-201ENST00000309877 CCDC171Q6TFL3 1326 aa27.11■■□□□ 1.93
IRF3-201ENST00000309877 ZNF589Q86UQ0 364 aaPredicted RBP27.11■■□□□ 1.93
IRF3-201ENST00000309877 SEC62Q99442 399 aaKnown RBP27.11■■□□□ 1.93
IRF3-201ENST00000309877 DAXXQ9UER7 740 aaPredicted RBP27.11■■□□□ 1.93
IRF3-201ENST00000309877 ZBTB7AO95365 584 aa27.1■■□□□ 1.93
IRF3-201ENST00000309877 PTH1RQ03431 593 aa27.1■■□□□ 1.93
IRF3-201ENST00000309877 WASHC4Q2M389 1173 aa27.1■■□□□ 1.93
IRF3-201ENST00000309877 CHRNA5P30532 468 aa27.09■■□□□ 1.93
IRF3-201ENST00000309877 MAP3K12Q12852 859 aa27.09■■□□□ 1.93
IRF3-201ENST00000309877 BECN1Q14457 450 aa27.09■■□□□ 1.93
IRF3-201ENST00000309877 R3HDM1Q15032 1099 aaKnown RBP27.09■■□□□ 1.93
IRF3-201ENST00000309877 SLFNL1Q499Z3 407 aa27.09■■□□□ 1.93
IRF3-201ENST00000309877 SLC9C2Q5TAH2 1124 aa27.09■■□□□ 1.93
IRF3-201ENST00000309877 C15orf52Q6ZUT6 534 aaKnown RBP27.09■■□□□ 1.93
IRF3-201ENST00000309877 TXNRD3Q86VQ6 643 aa27.09■■□□□ 1.93
IRF3-201ENST00000309877 COL11A2P13942 1736 aaPredicted RBP27.09■■□□□ 1.93
IRF3-201ENST00000309877 IRS2Q9Y4H2 1338 aa27.09■■□□□ 1.93
IRF3-201ENST00000309877 HSPA4P34932 840 aa27.08■■□□□ 1.93
IRF3-201ENST00000309877 ZNF804AQ7Z570 1209 aa27.08■■□□□ 1.93
IRF3-201ENST00000309877 CNKSR1Q969H4 720 aa27.08■■□□□ 1.93
IRF3-201ENST00000309877 C6orf229H3BNL8 230 aa27.08■■□□□ 1.92
IRF3-201ENST00000309877 CCDC129Q6ZRS4 1044 aa27.08■■□□□ 1.92
IRF3-201ENST00000309877 TBC1D16Q8TBP0 767 aa27.08■■□□□ 1.92
IRF3-201ENST00000309877 APPBP2Q92624 585 aa27.08■■□□□ 1.92
IRF3-201ENST00000309877 ADD2P35612 726 aa27.07■■□□□ 1.92
IRF3-201ENST00000309877 ANAPC15P60006 121 aa27.07■■□□□ 1.92
IRF3-201ENST00000309877 MTFR1LQ9H019 292 aa27.07■■□□□ 1.92
IRF3-201ENST00000309877 C10orf71Q711Q0 1435 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms