RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
LEMD3-201ENST00000308330 PDCD2Q16342 344 aaPredicted RBP17.43■□□□□ 0.38
LEMD3-201ENST00000308330 OLFM4Q6UX06 510 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 TRIM22Q8IYM9 498 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.43■□□□□ 0.38
LEMD3-201ENST00000308330 CEP128Q6ZU80 1094 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 FAM210AQ96ND0 272 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 CBFA2T2O43439 604 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 LMBR1LQ6UX01 489 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 LMNTD2Q8IXW0 634 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 TACO1Q9BSH4 297 aaKnown RBP17.43■□□□□ 0.38
LEMD3-201ENST00000308330 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
LEMD3-201ENST00000308330 METP08581 1390 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 PFDN1O60925 122 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
LEMD3-201ENST00000308330 ARHGEF12Q9NZN5 1544 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
LEMD3-201ENST00000308330 CCDC175P0C221 793 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 TTLL12Q14166 644 aaPredicted RBP17.42■□□□□ 0.38
LEMD3-201ENST00000308330 ATRIPQ8WXE1 791 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 INF2Q27J81 1249 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 ARMC9Q7Z3E5 817 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 MKNK2Q9HBH9 465 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 MAP3K5Q99683 1374 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 CEP104O60308 925 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 PDCP20941 246 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 KRT85P78386 507 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 ZSWIM4Q9H7M6 989 aa17.42■□□□□ 0.38
LEMD3-201ENST00000308330 SH2D4BQ5SQS7 431 aa17.41■□□□□ 0.38
LEMD3-201ENST00000308330 TRAPPC3LQ5T215 181 aa17.41■□□□□ 0.38
LEMD3-201ENST00000308330 NAPBQ9H115 298 aa17.41■□□□□ 0.38
LEMD3-201ENST00000308330 MFSD4BQ5TF39 518 aa17.41■□□□□ 0.38
LEMD3-201ENST00000308330 SBNO1A3KN83 1393 aa17.41■□□□□ 0.38
LEMD3-201ENST00000308330 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
LEMD3-201ENST00000308330 CABS1Q96KC9 395 aa17.41■□□□□ 0.38
LEMD3-201ENST00000308330 COL17A1Q9UMD9 1497 aaPredicted RBP17.41■□□□□ 0.38
LEMD3-201ENST00000308330 IMMTQ16891 758 aaKnown RBP17.4■□□□□ 0.38
LEMD3-201ENST00000308330 CCDC92Q53HC0 331 aaPredicted RBP17.4■□□□□ 0.38
LEMD3-201ENST00000308330 GOLGA1Q92805 767 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 STK32BQ9NY57 414 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 FAM184BQ9ULE4 1060 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 GRM8O00222 908 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
LEMD3-201ENST00000308330 MEIS3Q99687 375 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 UTP14AQ9BVJ6 771 aaKnown RBP17.4■□□□□ 0.38
LEMD3-201ENST00000308330 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
LEMD3-201ENST00000308330 KIF5CO60282 957 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 SPATA24Q86W54 205 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 ACRBPQ8NEB7 543 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 CCDC148Q8NFR7 591 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 PAF1Q8N7H5 531 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 JAKMIP1Q96N16 626 aaKnown RBP17.4■□□□□ 0.38
LEMD3-201ENST00000308330 ZNF287Q9HBT7 754 aa17.4■□□□□ 0.38
LEMD3-201ENST00000308330 EIF2AK4Q9P2K8 1649 aaKnown RBP17.4■□□□□ 0.38
LEMD3-201ENST00000308330 TRAF1Q13077 416 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 FBXO18Q8NFZ0 1043 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 MYO5CQ9NQX4 1742 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 CTAGE5O15320 804 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 EGFL6Q8IUX8 553 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 SLF2Q8IX21 1173 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 FAM76AQ8TAV0 307 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 IQSEC3Q9UPP2 1182 aaPredicted RBP17.39■□□□□ 0.37
LEMD3-201ENST00000308330 SLC8A1P32418 973 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 CAMK4Q16566 473 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 DDX27Q96GQ7 796 aaKnown RBP17.39■□□□□ 0.37
LEMD3-201ENST00000308330 MED4Q9NPJ6 270 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 RAD50Q92878 1312 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 PARD3Q8TEW0 1356 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 SMIM24O75264 130 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 CEP89Q96ST8 783 aa17.39■□□□□ 0.37
LEMD3-201ENST00000308330 NSFL1CQ9UNZ2 370 aaKnown RBP17.39■□□□□ 0.37
LEMD3-201ENST00000308330 LDHCP07864 332 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 IL13P35225 146 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 RWDD2BP57060 319 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 GNG11P61952 73 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 SEPT7Q16181 437 aaKnown RBP17.38■□□□□ 0.37
LEMD3-201ENST00000308330 LGR6Q9HBX8 967 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 ECHDC1Q9NTX5 307 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 ANKRD1Q15327 319 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 NDUFAB1O14561 156 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 APBA3O96018 575 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 SPECC1LQ69YQ0 1117 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 CFAP74Q9C0B2 1584 aa17.38■□□□□ 0.37
LEMD3-201ENST00000308330 ALDH1L1O75891 902 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 ZFYP08048 801 aaPredicted RBP17.37■□□□□ 0.37
LEMD3-201ENST00000308330 EVCP57679 992 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 ZNF365Q70YC5 407 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 PRPF38AQ8NAV1 312 aaKnown RBP17.37■□□□□ 0.37
LEMD3-201ENST00000308330 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
LEMD3-201ENST00000308330 ZFYVE9O95405 1425 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 KRT32Q14532 448 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 NYXQ9GZU5 481 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 CHCHD3Q9NX63 227 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms