RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 LMAN1P49257 510 aa18.95■□□□□ 0.62
CCDC8-201ENST00000307522 SNW1Q13573 536 aaKnown RBP18.95■□□□□ 0.62
CCDC8-201ENST00000307522 SART3Q15020 963 aaKnown RBP18.95■□□□□ 0.62
CCDC8-201ENST00000307522 HYPKQ9NX55 129 aa18.95■□□□□ 0.62
CCDC8-201ENST00000307522 FAM53CQ9NYF3 392 aa18.95■□□□□ 0.62
CCDC8-201ENST00000307522 TTC14Q96N46 770 aa18.95■□□□□ 0.62
CCDC8-201ENST00000307522 EP400Q96L91 3159 aa18.95■□□□□ 0.62
CCDC8-201ENST00000307522 BECN2A8MW95 431 aa18.95■□□□□ 0.62
CCDC8-201ENST00000307522 DDX58O95786 925 aaKnown RBP18.95■□□□□ 0.62
CCDC8-201ENST00000307522 GNL2Q13823 731 aaKnown RBP18.95■□□□□ 0.62
CCDC8-201ENST00000307522 ZSCAN26Q16670 478 aa18.95■□□□□ 0.62
CCDC8-201ENST00000307522 DHX16O60231 1041 aaKnown RBP18.94■□□□□ 0.62
CCDC8-201ENST00000307522 OAS2P29728 719 aaKnown RBP18.94■□□□□ 0.62
CCDC8-201ENST00000307522 GTF2A1P52655 376 aaPredicted RBP18.94■□□□□ 0.62
CCDC8-201ENST00000307522 CCZ1BP86790 482 aa18.94■□□□□ 0.62
CCDC8-201ENST00000307522 CCZ1P86791 482 aaPredicted RBP18.94■□□□□ 0.62
CCDC8-201ENST00000307522 PLEKHA4Q9H4M7 779 aa18.94■□□□□ 0.62
CCDC8-201ENST00000307522 PDRG1Q9NUG6 133 aa18.94■□□□□ 0.62
CCDC8-201ENST00000307522 IL2RBP14784 551 aa18.94■□□□□ 0.62
CCDC8-201ENST00000307522 GOLGA8FQ08AF8 430 aa18.94■□□□□ 0.62
CCDC8-201ENST00000307522 GOLGA8DPQ0D2H9 430 aa18.94■□□□□ 0.62
CCDC8-201ENST00000307522 FAM182BQ5T319 152 aa18.94■□□□□ 0.62
CCDC8-201ENST00000307522 PTH1RQ03431 593 aa18.93■□□□□ 0.62
CCDC8-201ENST00000307522 DRC1Q96MC2 740 aa18.93■□□□□ 0.62
CCDC8-201ENST00000307522 DNAI1Q9UI46 699 aa18.93■□□□□ 0.62
CCDC8-201ENST00000307522 TMCO3Q6UWJ1 677 aa18.93■□□□□ 0.62
CCDC8-201ENST00000307522 NEURL1BA8MQ27 555 aa18.93■□□□□ 0.62
CCDC8-201ENST00000307522 SASH3O75995 380 aa18.93■□□□□ 0.62
CCDC8-201ENST00000307522 G3BP1Q13283 466 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCDC8-201ENST00000307522 EAF2Q96CJ1 260 aaPredicted RBP18.93■□□□□ 0.62
CCDC8-201ENST00000307522 ZSWIM4Q9H7M6 989 aa18.93■□□□□ 0.62
CCDC8-201ENST00000307522 LINS1Q8NG48 757 aa18.92■□□□□ 0.62
CCDC8-201ENST00000307522 CCDC171Q6TFL3 1326 aa18.92■□□□□ 0.62
CCDC8-201ENST00000307522 H2AFXP16104 143 aaPredicted RBP18.92■□□□□ 0.62
CCDC8-201ENST00000307522 E2F4Q16254 413 aa18.92■□□□□ 0.62
CCDC8-201ENST00000307522 FOXR1Q6PIV2 292 aa18.92■□□□□ 0.62
CCDC8-201ENST00000307522 CLASRPQ8N2M8 674 aaKnown RBP18.92■□□□□ 0.62
CCDC8-201ENST00000307522 PGBD1Q96JS3 809 aa18.92■□□□□ 0.62
CCDC8-201ENST00000307522 WDR17Q8IZU2 1322 aa18.92■□□□□ 0.62
CCDC8-201ENST00000307522 DNAJC10Q8IXB1 793 aa18.91■□□□□ 0.62
CCDC8-201ENST00000307522 TDRD7Q8NHU6 1098 aaKnown RBP18.91■□□□□ 0.62
CCDC8-201ENST00000307522 NEUROD6Q96NK8 337 aa18.91■□□□□ 0.62
CCDC8-201ENST00000307522 OSBPL3Q9H4L5 887 aa18.91■□□□□ 0.62
CCDC8-201ENST00000307522 SASH1O94885 1247 aa18.91■□□□□ 0.62
CCDC8-201ENST00000307522 GCKRQ14397 625 aa18.91■□□□□ 0.62
CCDC8-201ENST00000307522 TEX35Q5T0J7 233 aa18.91■□□□□ 0.62
CCDC8-201ENST00000307522 URI1O94763 535 aaPredicted RBP18.91■□□□□ 0.62
CCDC8-201ENST00000307522 UBXN4Q92575 508 aa18.91■□□□□ 0.62
CCDC8-201ENST00000307522 TPCN1Q9ULQ1 816 aa18.91■□□□□ 0.62
CCDC8-201ENST00000307522 LMBR1LQ6UX01 489 aa18.9■□□□□ 0.62
CCDC8-201ENST00000307522 ISM2Q6H9L7 571 aa18.9■□□□□ 0.62
CCDC8-201ENST00000307522 AOPEPQ8N6M6 819 aa18.9■□□□□ 0.62
CCDC8-201ENST00000307522 CARD6Q9BX69 1037 aa18.9■□□□□ 0.62
CCDC8-201ENST00000307522 E4F1Q66K89 784 aaPredicted RBP18.89■□□□□ 0.62
CCDC8-201ENST00000307522 BABAM1Q9NWV8 329 aa18.89■□□□□ 0.62
CCDC8-201ENST00000307522 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
CCDC8-201ENST00000307522 SMC2O95347 1197 aa18.89■□□□□ 0.61
CCDC8-201ENST00000307522 LEO1Q8WVC0 666 aaPredicted RBP18.89■□□□□ 0.61
CCDC8-201ENST00000307522 FAM227BQ96M60 508 aa18.89■□□□□ 0.61
CCDC8-201ENST00000307522 TMOD3Q9NYL9 352 aa18.89■□□□□ 0.61
CCDC8-201ENST00000307522 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
CCDC8-201ENST00000307522 UTRNP46939 3433 aa18.89■□□□□ 0.61
CCDC8-201ENST00000307522 NOP2P46087 812 aaKnown RBP18.89■□□□□ 0.61
CCDC8-201ENST00000307522 TAF6LQ9Y6J9 622 aa18.89■□□□□ 0.61
CCDC8-201ENST00000307522 MNS1Q8NEH6 495 aa18.88■□□□□ 0.61
CCDC8-201ENST00000307522 PI4K2BQ8TCG2 481 aa18.88■□□□□ 0.61
CCDC8-201ENST00000307522 FAM89AQ96GI7 184 aa18.88■□□□□ 0.61
CCDC8-201ENST00000307522 PPP1R13BQ96KQ4 1090 aa18.88■□□□□ 0.61
CCDC8-201ENST00000307522 LSG1Q9H089 658 aaKnown RBP18.88■□□□□ 0.61
CCDC8-201ENST00000307522 CLSTN2Q9H4D0 955 aa18.88■□□□□ 0.61
CCDC8-201ENST00000307522 POLA2Q14181 598 aa18.88■□□□□ 0.61
CCDC8-201ENST00000307522 TMC6Q7Z403 805 aa18.88■□□□□ 0.61
CCDC8-201ENST00000307522 TBC1D2BQ9UPU7 963 aa18.88■□□□□ 0.61
CCDC8-201ENST00000307522 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC8-201ENST00000307522 JAK2O60674 1132 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 TIMM10P62072 90 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 TFCP2Q12800 502 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 PIGBQ92521 554 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 BIN1O00499 593 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 SGSM2O43147 1006 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 SALL3Q9BXA9 1300 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 LMTK3Q96Q04 1460 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 SLIT3O75094 1523 aa18.87■□□□□ 0.61
CCDC8-201ENST00000307522 METTL22Q9BUU2 404 aaPredicted RBP18.87■□□□□ 0.61
CCDC8-201ENST00000307522 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
CCDC8-201ENST00000307522 HOXB7P09629 217 aa18.86■□□□□ 0.61
CCDC8-201ENST00000307522 IQCB1Q15051 598 aa18.86■□□□□ 0.61
CCDC8-201ENST00000307522 RRP15Q9Y3B9 282 aaKnown RBP18.86■□□□□ 0.61
CCDC8-201ENST00000307522 SOS2Q07890 1332 aaPredicted RBP18.86■□□□□ 0.61
CCDC8-201ENST00000307522 SMC1AQ14683 1233 aaKnown RBP18.85■□□□□ 0.61
CCDC8-201ENST00000307522 CASQ1P31415 396 aa18.85■□□□□ 0.61
CCDC8-201ENST00000307522 TSPYL1Q9H0U9 437 aa18.85■□□□□ 0.61
CCDC8-201ENST00000307522 SNRKQ9NRH2 765 aa18.85■□□□□ 0.61
CCDC8-201ENST00000307522 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
CCDC8-201ENST00000307522 PHACTR2O75167 634 aa18.85■□□□□ 0.61
CCDC8-201ENST00000307522 HSP90AB3PQ58FF7 597 aa18.85■□□□□ 0.61
CCDC8-201ENST00000307522 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.85■□□□□ 0.61
CCDC8-201ENST00000307522 TXLNBQ8N3L3 684 aa18.85■□□□□ 0.61
CCDC8-201ENST00000307522 PUS3Q9BZE2 481 aaKnown RBP18.85■□□□□ 0.61
CCDC8-201ENST00000307522 FANCGO15287 622 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms