RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 PRPF40BQ6NWY9 871 aaKnown RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 ZNF790Q6PG37 636 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 APTXQ7Z2E3 356 aaKnown RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 RILPL2Q969X0 211 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 HPS5Q9UPZ3 1129 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 COL24A1Q17RW2 1714 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 MROH7-TTC4A0A0A0MT08 1334 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 SASH3O75995 380 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 CYP21A2P08686 494 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 GCKRQ14397 625 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 AXDND1Q5T1B0 1012 aaPredicted RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 REXO1L1PQ8IX06 675 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 PDCL2Q8N4E4 241 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 DCAF5Q96JK2 942 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 SOS2Q07890 1332 aaPredicted RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 A0A087WWV3 80 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 FIBPO43427 364 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 PFKFB2O60825 505 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 TPM3P06753 285 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 BMP6P22004 513 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 CYP2C19P33261 490 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 MDM2Q00987 491 aaPredicted RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 ATL3Q6DD88 541 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 LLPHQ9BRT6 129 aaKnown RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 HPSEQ9Y251 543 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 ZMYM6O95789 1325 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 ZC3H4Q9UPT8 1303 aaKnown RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 SRGAP3O43295 1099 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 FOXO4P98177 505 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 NOL8Q76FK4 1167 aaKnown RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 KIFC2Q96AC6 838 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 HAUS7Q99871 368 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 DBNLQ9UJU6 430 aaKnown RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 ZNF215Q9UL58 517 aaPredicted RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 MAP3K2Q9Y2U5 619 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 FOCADQ5VW36 1801 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 PTPN12Q05209 780 aaKnown RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 ANKRD1Q15327 319 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 FOXD4L6Q3SYB3 417 aaPredicted RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 SLC4A10Q6U841 1118 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 FOXD4L3Q6VB84 417 aaPredicted RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 JAKMIP1Q96N16 626 aaKnown RBP6.44□□□□□ -1.38
VPS50-202ENST00000305866 TACC3Q9Y6A5 838 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 RIC1Q4ADV7 1423 aa6.44□□□□□ -1.38
VPS50-202ENST00000305866 MAST2Q6P0Q8 1798 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 ERVV-2B6SEH9 535 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 FECHP22830 423 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 PSME1Q06323 249 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 MAP3K11Q16584 847 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 ZNF530Q6P9A1 599 aaPredicted RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 ATG9AQ7Z3C6 839 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 SHISA4Q96DD7 197 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 MYH7BA7E2Y1 1941 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 DDX58O95786 925 aaKnown RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 CCDC192P0DO97 292 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 IRX5P78411 483 aaPredicted RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 RSRC2Q7L4I2 434 aaKnown RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 DNAJC25Q9H1X3 360 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 BICC1Q9H694 974 aaKnown RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 DDX19AQ9NUU7 478 aaKnown RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 PAXBP1Q9Y5B6 917 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 ZNF646O15015 1829 aaPredicted RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 SURF6O75683 361 aaKnown RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 FAM193AP78312 1265 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 PLBD2Q8NHP8 589 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 EDC3Q96F86 508 aaKnown RBP6.43□□□□□ -1.38
VPS50-202ENST00000305866 TUBE1Q9UJT0 475 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 ATP6V1DQ9Y5K8 247 aa6.43□□□□□ -1.38
VPS50-202ENST00000305866 RGL2O15211 777 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 FGD1P98174 961 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 CWF19L2Q2TBE0 894 aaKnown RBP6.42□□□□□ -1.38
VPS50-202ENST00000305866 NAA16Q6N069 864 aaPredicted RBP6.42□□□□□ -1.38
VPS50-202ENST00000305866 CLASRPQ8N2M8 674 aaKnown RBP6.42□□□□□ -1.38
VPS50-202ENST00000305866 GPATCH3Q96I76 525 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 PPP1R13BQ96KQ4 1090 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 MAP3K14Q99558 947 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 DSCC1Q9BVC3 393 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 BCL11BQ9C0K0 894 aaPredicted RBP6.42□□□□□ -1.38
VPS50-202ENST00000305866 PARP3Q9Y6F1 533 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 MAP3K15Q6ZN16 1313 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 CAVIN2O95810 425 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 CAMK4Q16566 473 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 KRT28Q7Z3Y7 464 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 FOXP4Q8IVH2 680 aaPredicted RBP6.42□□□□□ -1.38
VPS50-202ENST00000305866 CKAP2LQ8IYA6 745 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 SPC24Q8NBT2 197 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 SEC62Q99442 399 aaKnown RBP6.42□□□□□ -1.38
VPS50-202ENST00000305866 NUP62CLQ9H1M0 184 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 HELLSQ9NRZ9 838 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 TRIM6-TRIM34B2RNG4 842 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 KIF28PB7ZC32 967 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 PSMA5P28066 241 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 KRT32Q14532 448 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 PTPAQ15257 358 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 ELOA2Q8IYF1 753 aaPredicted RBP6.42□□□□□ -1.38
VPS50-202ENST00000305866 DDX54Q8TDD1 881 aaKnown RBP6.42□□□□□ -1.38
VPS50-202ENST00000305866 USP28Q96RU2 1077 aa6.42□□□□□ -1.38
VPS50-202ENST00000305866 SMC3Q9UQE7 1217 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms