RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 CCDC96Q2M329 555 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 C8orf58Q8NAV2 365 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 RAB11FIP4Q86YS3 637 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 TACC1O75410 805 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 MYO1BO43795 1136 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 IDEP14735 1019 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 UBE4AQ14139 1066 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 OTUD6BQ8N6M0 293 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 CHMLP26374 656 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 KRT83P78385 493 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 CAVIN4Q5BKX8 364 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 HDXQ7Z353 690 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 UBA5Q9GZZ9 404 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 YEATS2Q9ULM3 1422 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 ATP2C2O75185 946 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 PRPF4BQ13523 1007 aaKnown RBP18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 AKAP4Q5JQC9 854 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 TTC41PQ6P2S7 1318 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 KRT86O43790 486 aa18.77■□□□□ 0.59
SNAPC4-201ENST00000298532 EVCP57679 992 aa18.77■□□□□ 0.59
SNAPC4-201ENST00000298532 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.59
SNAPC4-201ENST00000298532 SLC5A1P13866 664 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 NSRP1Q9H0G5 558 aaKnown RBP18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 MAGI3Q5TCQ9 1506 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 VAMP4O75379 141 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 RBM5P52756 815 aaKnown RBP eCLIP18.76■□□□□ 0.593e-7■■■■□ 25.8
SNAPC4-201ENST00000298532 CTNNBL1Q8WYA6 563 aaPredicted RBP18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 MCMDC2Q4G0Z9 681 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 DDX46Q7L014 1031 aaKnown RBP18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 CCDC155Q8N6L0 562 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 ZBTB43O43298 467 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 MARCKSP29966 332 aaPredicted RBP18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 ST5P78524 1137 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 HOOK3Q86VS8 718 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 PHACTR2O75167 634 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 AFMP43652 599 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 ATL3Q6DD88 541 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 MFSD6Q6ZSS7 791 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 ZFYP08048 801 aaPredicted RBP18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 SLF2Q8IX21 1173 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 SNRKQ9NRH2 765 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 ZFYVE9O95405 1425 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 KIF5BP33176 963 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 KARSQ15046 597 aaKnown RBP18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 CCDC121Q6ZUS5 278 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 CDC5LQ99459 802 aaKnown RBP18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 PUF60Q9UHX1 559 aaKnown RBP18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 NLRP1Q9C000 1473 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 ARFGAP2Q8N6H7 521 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 KIAA0753Q2KHM9 967 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 ZNF569Q5MCW4 686 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 LZTFL1Q9NQ48 299 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 POLD1P28340 1107 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 PPP2R3AQ06190 1150 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 KIF5AQ12840 1032 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 KRBA2Q6ZNG9 492 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 LRRC27Q9C0I9 530 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 FSD2A1L4K1 749 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 CETN1Q12798 172 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 CREB3L3Q68CJ9 461 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 MSL1Q68DK7 614 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 UTP14AQ9BVJ6 771 aaKnown RBP18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 LMBRD1Q9NUN5 540 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 EXOC1Q9NV70 894 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 NMIQ13287 307 aaPredicted RBP18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 UBE3BQ7Z3V4 1068 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 IP6K1Q92551 441 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 RHOXF2BP0C7M4 288 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 TCERG1LQ5VWI1 586 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 RHOXF2Q9BQY4 288 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 ZNF444Q8N0Y2 327 aaPredicted RBP18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 TESK2Q96S53 571 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 ZCCHC11Q5TAX3 1644 aaKnown RBP18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 KDM5DQ9BY66 1539 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 PSMA7O14818 248 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 ALDH1L1O75891 902 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 ZNF500O60304 480 aaPredicted RBP18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 NBPF7P0C2Y1 421 aaPredicted RBP18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 C6orf163Q5TEZ5 329 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 FAM76AQ8TAV0 307 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 MACROD2A1Z1Q3 448 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 ANKS4BQ8N8V4 417 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 DRC1Q96MC2 740 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 PER1O15534 1290 aaPredicted RBP18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 MYL5Q02045 173 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 BRAPQ7Z569 592 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 PPP1R9BQ96SB3 815 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 SELENOOQ9BVL4 669 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 FAM160A1Q05DH4 1040 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 NPHP4O75161 1426 aaPredicted RBP18.71■□□□□ 0.59
SNAPC4-201ENST00000298532 CEP57Q86XR8 500 aa18.71■□□□□ 0.59
SNAPC4-201ENST00000298532 BAG1Q99933 345 aaPredicted RBP18.71■□□□□ 0.59
SNAPC4-201ENST00000298532 ZBTB7BO15156 539 aaPredicted RBP18.71■□□□□ 0.59
SNAPC4-201ENST00000298532 TMTC2Q8N394 836 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms