RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TMCO5AQ8N6Q1 288 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 CPLX3Q8WVH0 158 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 RPS6KA3P51812 740 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 TUBB2AQ13885 445 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 CYB5RLQ6IPT4 315 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 MIER3Q7Z3K6 550 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 CCHCR1Q8TD31 782 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 ZSCAN31Q96LW9 406 aaPredicted RBP13.28□□□□□ -0.28
SNIP1-201ENST00000296215 TUBB2BQ9BVA1 445 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 DACH1Q9UI36 760 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 TPCN1Q9ULQ1 816 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 VIMP08670 466 aaKnown RBP13.28□□□□□ -0.28
SNIP1-201ENST00000296215 PARP1P09874 1014 aaKnown RBP13.28□□□□□ -0.28
SNIP1-201ENST00000296215 MTA1Q13330 715 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 GDAP1L1Q96MZ0 367 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 MPHOSPH6Q99547 160 aaKnown RBP13.28□□□□□ -0.28
SNIP1-201ENST00000296215 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
SNIP1-201ENST00000296215 PLA2G4AP47712 749 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 CCDC129Q6ZRS4 1044 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 CCDC110Q8TBZ0 833 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 PARD3BQ8TEW8 1205 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 PPANQ9NQ55 473 aaKnown RBP13.28□□□□□ -0.28
SNIP1-201ENST00000296215 STK38LQ9Y2H1 464 aa13.28□□□□□ -0.28
SNIP1-201ENST00000296215 KBTBD12Q3ZCT8 623 aa13.27□□□□□ -0.28
SNIP1-201ENST00000296215 SLC44A4Q53GD3 710 aa13.27□□□□□ -0.28
SNIP1-201ENST00000296215 DDX46Q7L014 1031 aaKnown RBP13.27□□□□□ -0.28
SNIP1-201ENST00000296215 NAP1L3Q99457 506 aaPredicted RBP13.27□□□□□ -0.28
SNIP1-201ENST00000296215 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.28
SNIP1-201ENST00000296215 LARSQ9P2J5 1176 aaKnown RBP13.27□□□□□ -0.28
SNIP1-201ENST00000296215 ZRANB2O95218 330 aaKnown RBP eCLIP13.27□□□□□ -0.28
SNIP1-201ENST00000296215 DEUP1Q05D60 604 aa13.27□□□□□ -0.28
SNIP1-201ENST00000296215 Q4G0T1 1027 aa13.27□□□□□ -0.28
SNIP1-201ENST00000296215 C6orf163Q5TEZ5 329 aa13.27□□□□□ -0.28
SNIP1-201ENST00000296215 CPLX2Q6PUV4 134 aaKnown RBP13.27□□□□□ -0.28
SNIP1-201ENST00000296215 GET4Q7L5D6 327 aaPredicted RBP13.27□□□□□ -0.28
SNIP1-201ENST00000296215 CEP63Q96MT8 703 aa13.27□□□□□ -0.28
SNIP1-201ENST00000296215 JADE2Q9NQC1 790 aa13.27□□□□□ -0.28
SNIP1-201ENST00000296215 IFNKQ9P0W0 207 aa13.27□□□□□ -0.28
SNIP1-201ENST00000296215 OATP04181 439 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 ATP1A2P50993 1020 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.29
SNIP1-201ENST00000296215 CCDC155Q8N6L0 562 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 FAM81AQ8TBF8 368 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
SNIP1-201ENST00000296215 TSC22D4Q9Y3Q8 395 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 CYP46A1Q9Y6A2 500 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 USP19O94966 1318 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 CACNA2D4Q7Z3S7 1137 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.29
SNIP1-201ENST00000296215 E2F6O75461 281 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 PSMA5P28066 241 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 NAA15Q9BXJ9 866 aaKnown RBP13.26□□□□□ -0.29
SNIP1-201ENST00000296215 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 CHGAP10645 457 aaKnown RBP13.26□□□□□ -0.29
SNIP1-201ENST00000296215 FERP16591 822 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 ICA1Q05084 483 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 TRIM7Q9C029 511 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 ZMYM3Q14202 1370 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 IMPACTQ9P2X3 320 aa13.26□□□□□ -0.29
SNIP1-201ENST00000296215 KCNB1Q14721 858 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
SNIP1-201ENST00000296215 GOLGA8KD6RF30 607 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 BIN1O00499 593 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 GNAT1P11488 350 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 XBP1P17861 261 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 SPATA17Q96L03 361 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 FGD4Q96M96 766 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 MMADHCQ9H3L0 296 aaPredicted RBP13.25□□□□□ -0.29
SNIP1-201ENST00000296215 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 SPECC1L-ADORA2AF8WAN1 911 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 VAV2P52735 878 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 PKP1Q13835 747 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 SPATA21Q7Z572 469 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
SNIP1-201ENST00000296215 EIF4E1BA6NMX2 242 aaKnown RBP13.25□□□□□ -0.29
SNIP1-201ENST00000296215 CUL4BQ13620 913 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 C3orf20Q8ND61 904 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 ALS2CR12Q96Q35 445 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 TTC41PQ6P2S7 1318 aa13.25□□□□□ -0.29
SNIP1-201ENST00000296215 MYO1FO00160 1098 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 SMARCA5O60264 1052 aaPredicted RBP13.24□□□□□ -0.29
SNIP1-201ENST00000296215 F13A1P00488 732 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 MFN1Q8IWA4 741 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 GCOM1H8Y6P7 765 aaPredicted RBP13.24□□□□□ -0.29
SNIP1-201ENST00000296215 MYZAPP0CAP1 466 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 CNGA1P29973 690 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 DMPKQ09013 629 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 CASP8Q14790 479 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 PLEKHH2Q8IVE3 1493 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 FYB1O15117 783 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 RNF8O76064 485 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 VPS41P49754 854 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 CCNHP51946 323 aaPredicted RBP13.24□□□□□ -0.29
SNIP1-201ENST00000296215 RCSD1Q6JBY9 416 aa13.24□□□□□ -0.29
SNIP1-201ENST00000296215 ATL2Q8NHH9 583 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms