RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 CNNM1Q9NRU3 951 aa23.65■■□□□ 1.38
CXCL16-201ENST00000293778 A0A0G2JLW4 131 aa23.65■■□□□ 1.38
CXCL16-201ENST00000293778 EXOSC10Q01780 885 aaKnown RBP23.65■■□□□ 1.38
CXCL16-201ENST00000293778 WASHC4Q2M389 1173 aa23.65■■□□□ 1.38
CXCL16-201ENST00000293778 NUP98P52948 1817 aa23.64■■□□□ 1.38
CXCL16-201ENST00000293778 PDE8AO60658 829 aa23.64■■□□□ 1.38
CXCL16-201ENST00000293778 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.38
CXCL16-201ENST00000293778 PFKFB2O60825 505 aa23.64■■□□□ 1.37
CXCL16-201ENST00000293778 SCRN1Q12765 414 aa23.64■■□□□ 1.37
CXCL16-201ENST00000293778 MYH3P11055 1940 aa23.63■■□□□ 1.37
CXCL16-201ENST00000293778 FAM173BQ6P4H8 233 aa23.63■■□□□ 1.37
CXCL16-201ENST00000293778 AGXT2Q9BYV1 514 aa23.63■■□□□ 1.37
CXCL16-201ENST00000293778 TTLL5Q6EMB2 1281 aa23.63■■□□□ 1.37
CXCL16-201ENST00000293778 TTC6Q86TZ1 520 aa23.63■■□□□ 1.37
CXCL16-201ENST00000293778 LLPHQ9BRT6 129 aaKnown RBP23.63■■□□□ 1.37
CXCL16-201ENST00000293778 CTNNA3Q9UI47 895 aa23.63■■□□□ 1.37
CXCL16-201ENST00000293778 ELP1O95163 1332 aa23.62■■□□□ 1.37
CXCL16-201ENST00000293778 UBN2Q6ZU65 1347 aa23.62■■□□□ 1.37
CXCL16-201ENST00000293778 PI16Q6UXB8 463 aa23.62■■□□□ 1.37
CXCL16-201ENST00000293778 ZNF34Q8IZ26 560 aa23.62■■□□□ 1.37
CXCL16-201ENST00000293778 APPBP2Q92624 585 aa23.62■■□□□ 1.37
CXCL16-201ENST00000293778 APOBRQ0VD83 1088 aa23.61■■□□□ 1.37
CXCL16-201ENST00000293778 HS1BP3Q53T59 392 aa23.61■■□□□ 1.37
CXCL16-201ENST00000293778 ZSCAN30Q86W11 494 aa23.61■■□□□ 1.37
CXCL16-201ENST00000293778 VGLL2Q8N8G2 317 aa23.61■■□□□ 1.37
CXCL16-201ENST00000293778 FAM184AQ8NB25 1140 aa23.61■■□□□ 1.37
CXCL16-201ENST00000293778 SMARCC2Q8TAQ2 1214 aa23.61■■□□□ 1.37
CXCL16-201ENST00000293778 DDX11Q96FC9 970 aa23.61■■□□□ 1.37
CXCL16-201ENST00000293778 SPATA31A1Q5TZJ5 1347 aa23.61■■□□□ 1.37
CXCL16-201ENST00000293778 ADAMTS2O95450 1211 aa23.6■■□□□ 1.37
CXCL16-201ENST00000293778 DDB1Q16531 1140 aa23.6■■□□□ 1.37
CXCL16-201ENST00000293778 MCAMP43121 646 aa23.6■■□□□ 1.37
CXCL16-201ENST00000293778 KLHL34Q8N239 644 aa23.6■■□□□ 1.37
CXCL16-201ENST00000293778 ZNF512BQ96KM6 892 aaPredicted RBP23.6■■□□□ 1.37
CXCL16-201ENST00000293778 SCAND2PQ9GZW5 306 aaPredicted RBP23.6■■□□□ 1.37
CXCL16-201ENST00000293778 A0A0G2JS52 829 aa23.59■■□□□ 1.37
CXCL16-201ENST00000293778 H3BQV1 296 aa23.59■■□□□ 1.37
CXCL16-201ENST00000293778 FOXP2O15409 715 aa23.59■■□□□ 1.37
CXCL16-201ENST00000293778 PDE8BO95263 885 aa23.59■■□□□ 1.37
CXCL16-201ENST00000293778 IFFO2Q5TF58 517 aa23.59■■□□□ 1.37
CXCL16-201ENST00000293778 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.59■■□□□ 1.37
CXCL16-201ENST00000293778 THRAP3Q9Y2W1 955 aaKnown RBP23.59■■□□□ 1.37
CXCL16-201ENST00000293778 EIF5P55010 431 aaKnown RBP23.59■■□□□ 1.37
CXCL16-201ENST00000293778 IMMTQ16891 758 aaKnown RBP23.59■■□□□ 1.37
CXCL16-201ENST00000293778 NSUN7Q8NE18 718 aaKnown RBP23.59■■□□□ 1.37
CXCL16-201ENST00000293778 PUS7LQ9H0K6 701 aaKnown RBP23.59■■□□□ 1.37
CXCL16-201ENST00000293778 CCDC87Q9NVE4 849 aa23.59■■□□□ 1.37
CXCL16-201ENST00000293778 SPATA32Q96LK8 384 aa23.58■■□□□ 1.37
CXCL16-201ENST00000293778 RESTQ13127 1097 aa23.57■■□□□ 1.36
CXCL16-201ENST00000293778 INTS5Q6P9B9 1019 aaKnown RBP23.57■■□□□ 1.36
CXCL16-201ENST00000293778 TFIP11Q9UBB9 837 aaKnown RBP23.57■■□□□ 1.36
CXCL16-201ENST00000293778 ZSCAN25Q6NSZ9 544 aa23.57■■□□□ 1.36
CXCL16-201ENST00000293778 CHST3Q7LGC8 479 aa23.57■■□□□ 1.36
CXCL16-201ENST00000293778 AK7Q96M32 723 aa23.57■■□□□ 1.36
CXCL16-201ENST00000293778 FGAP02671 866 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 HMGN5P82970 282 aaKnown RBP23.56■■□□□ 1.36
CXCL16-201ENST00000293778 UVSSAQ2YD98 709 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 ZNF274Q96GC6 653 aaPredicted RBP23.56■■□□□ 1.36
CXCL16-201ENST00000293778 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 MYH7P12883 1935 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 NRAPQ86VF7 1730 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 NWD2Q9ULI1 1742 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 PTPDC1A2A3K4 754 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 GPAA1O43292 621 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 CTDNEP1O95476 244 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 ATP6V1AP38606 617 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 HAND2P61296 217 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 CCT2P78371 535 aaKnown RBP23.56■■□□□ 1.36
CXCL16-201ENST00000293778 TTF1Q15361 905 aaPredicted RBP23.56■■□□□ 1.36
CXCL16-201ENST00000293778 GIMAP6Q6P9H5 292 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 LEO1Q8WVC0 666 aaPredicted RBP23.56■■□□□ 1.36
CXCL16-201ENST00000293778 ZSCAN16Q9H4T2 348 aaPredicted RBP23.56■■□□□ 1.36
CXCL16-201ENST00000293778 NAP1L2Q9ULW6 460 aaPredicted RBP23.56■■□□□ 1.36
CXCL16-201ENST00000293778 KIF3AQ9Y496 699 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 SLIT2O94813 1529 aa23.56■■□□□ 1.36
CXCL16-201ENST00000293778 AKAP11Q9UKA4 1901 aa23.55■■□□□ 1.36
CXCL16-201ENST00000293778 PDIA3P30101 505 aaKnown RBP23.55■■□□□ 1.36
CXCL16-201ENST00000293778 CRKLP46109 303 aaKnown RBP23.55■■□□□ 1.36
CXCL16-201ENST00000293778 FBXL16Q8N461 479 aa23.55■■□□□ 1.36
CXCL16-201ENST00000293778 LRP5O75197 1615 aa23.55■■□□□ 1.36
CXCL16-201ENST00000293778 ADD2P35612 726 aa23.55■■□□□ 1.36
CXCL16-201ENST00000293778 SUSD4Q5VX71 490 aa23.55■■□□□ 1.36
CXCL16-201ENST00000293778 GOLGA6L4A6NEF3 574 aa23.54■■□□□ 1.36
CXCL16-201ENST00000293778 MSNP26038 577 aaKnown RBP23.54■■□□□ 1.36
CXCL16-201ENST00000293778 PUM3Q15397 648 aaKnown RBP23.54■■□□□ 1.36
CXCL16-201ENST00000293778 CCDC102BQ68D86 513 aa23.54■■□□□ 1.36
CXCL16-201ENST00000293778 MARCH10Q8NA82 808 aaPredicted RBP23.54■■□□□ 1.36
CXCL16-201ENST00000293778 CHMP4CQ96CF2 233 aa23.54■■□□□ 1.36
CXCL16-201ENST00000293778 FUCA2Q9BTY2 467 aa23.54■■□□□ 1.36
CXCL16-201ENST00000293778 MROH5Q6ZUA9 1318 aa23.54■■□□□ 1.36
CXCL16-201ENST00000293778 HCLS1P14317 486 aaPredicted RBP23.53■■□□□ 1.36
CXCL16-201ENST00000293778 SLC9C2Q5TAH2 1124 aa23.53■■□□□ 1.36
CXCL16-201ENST00000293778 NAA16Q6N069 864 aaPredicted RBP23.53■■□□□ 1.36
CXCL16-201ENST00000293778 NCOA5Q9HCD5 579 aaKnown RBP23.53■■□□□ 1.36
CXCL16-201ENST00000293778 LOC102724428A0A0B4J2F2 783 aa23.53■■□□□ 1.36
CXCL16-201ENST00000293778 UQCRFS1P1P0C7P4 283 aa23.53■■□□□ 1.36
CXCL16-201ENST00000293778 ARID4AP29374 1257 aaPredicted RBP23.53■■□□□ 1.36
CXCL16-201ENST00000293778 PHKA1P46020 1223 aa23.53■■□□□ 1.36
CXCL16-201ENST00000293778 SIK1P57059 783 aa23.53■■□□□ 1.36
CXCL16-201ENST00000293778 LPIN2Q92539 896 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms