RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 ZNF354CQ86Y25 554 aa22.11■■□□□ 1.13
LSM11-201ENST00000286307 CTNNBL1Q8WYA6 563 aaPredicted RBP22.11■■□□□ 1.13
LSM11-201ENST00000286307 PUS7Q96PZ0 661 aaKnown RBP22.1■■□□□ 1.13
LSM11-201ENST00000286307 TDRD12Q587J7 1177 aaKnown RBP22.1■■□□□ 1.13
LSM11-201ENST00000286307 RBM8AQ9Y5S9 174 aaKnown RBP22.1■■□□□ 1.13
LSM11-201ENST00000286307 CCDC191Q8NCU4 936 aa22.1■■□□□ 1.13
LSM11-201ENST00000286307 ZKSCAN3Q9BRR0 538 aa22.1■■□□□ 1.13
LSM11-201ENST00000286307 CENPHQ9H3R5 247 aa22.1■■□□□ 1.13
LSM11-201ENST00000286307 PLEKHH1Q9ULM0 1364 aa22.09■■□□□ 1.13
LSM11-201ENST00000286307 TAF12Q16514 161 aa22.09■■□□□ 1.13
LSM11-201ENST00000286307 EXOC1Q9NV70 894 aa22.09■■□□□ 1.13
LSM11-201ENST00000286307 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.09■■□□□ 1.13
LSM11-201ENST00000286307 SMCR8Q8TEV9 937 aaPredicted RBP22.09■■□□□ 1.13
LSM11-201ENST00000286307 LRRC27Q9C0I9 530 aa22.09■■□□□ 1.13
LSM11-201ENST00000286307 NECAB1Q8N987 351 aa22.09■■□□□ 1.13
LSM11-201ENST00000286307 ISM2Q6H9L7 571 aa22.08■■□□□ 1.13
LSM11-201ENST00000286307 PARP1P09874 1014 aaKnown RBP22.08■■□□□ 1.13
LSM11-201ENST00000286307 Q6ZUG5 572 aa22.08■■□□□ 1.13
LSM11-201ENST00000286307 DPH6Q7L8W6 267 aa22.08■■□□□ 1.13
LSM11-201ENST00000286307 GBP2P32456 591 aaPredicted RBP22.08■■□□□ 1.13
LSM11-201ENST00000286307 DNA2P51530 1060 aa22.08■■□□□ 1.13
LSM11-201ENST00000286307 AATFQ9NY61 560 aaKnown RBP eCLIP22.08■■□□□ 1.13
LSM11-201ENST00000286307 RTL9Q8NET4 1388 aa22.08■■□□□ 1.12
LSM11-201ENST00000286307 GOLGA6L10A6NI86 522 aa22.08■■□□□ 1.12
LSM11-201ENST00000286307 BIN1O00499 593 aa22.08■■□□□ 1.12
LSM11-201ENST00000286307 STX6O43752 255 aa22.08■■□□□ 1.12
LSM11-201ENST00000286307 CTNNA2P26232 953 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 TIMM10P62072 90 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 FAM43AQ8N2R8 423 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 SYNCQ9H7C4 482 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 BRDTQ58F21 947 aaPredicted RBP22.07■■□□□ 1.12
LSM11-201ENST00000286307 AXDND1Q5T1B0 1012 aaPredicted RBP22.07■■□□□ 1.12
LSM11-201ENST00000286307 ZNF771Q7L3S4 317 aaPredicted RBP22.07■■□□□ 1.12
LSM11-201ENST00000286307 PIK3C2GO75747 1445 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 WDR66Q8TBY9 1149 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 DCPSQ96C86 337 aaKnown RBP22.07■■□□□ 1.12
LSM11-201ENST00000286307 CSADQ9Y600 493 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 A0A1B0GUL7 405 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 ERVV-2B6SEH9 535 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 TAX1BP1Q86VP1 789 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 ANO10Q9NW15 660 aa22.07■■□□□ 1.12
LSM11-201ENST00000286307 PSMD1Q99460 953 aa22.06■■□□□ 1.12
LSM11-201ENST00000286307 STAT6P42226 847 aa22.06■■□□□ 1.12
LSM11-201ENST00000286307 ANKRD44Q8N8A2 993 aa22.06■■□□□ 1.12
LSM11-201ENST00000286307 CPLX3Q8WVH0 158 aa22.06■■□□□ 1.12
LSM11-201ENST00000286307 SDSP20132 328 aa22.06■■□□□ 1.12
LSM11-201ENST00000286307 PDE1AP54750 535 aa22.06■■□□□ 1.12
LSM11-201ENST00000286307 ZRSR2Q15696 482 aaKnown RBP22.06■■□□□ 1.12
LSM11-201ENST00000286307 NUP88Q99567 741 aaPredicted RBP22.06■■□□□ 1.12
LSM11-201ENST00000286307 IRX3P78415 501 aaPredicted RBP22.06■■□□□ 1.12
LSM11-201ENST00000286307 DOK7Q18PE1 504 aa22.06■■□□□ 1.12
LSM11-201ENST00000286307 ARHGAP29Q52LW3 1261 aa22.05■■□□□ 1.12
LSM11-201ENST00000286307 ARMT1Q9H993 441 aa22.05■■□□□ 1.12
LSM11-201ENST00000286307 PTPDC1A2A3K4 754 aa22.05■■□□□ 1.12
LSM11-201ENST00000286307 GTF2IP78347 998 aa22.05■■□□□ 1.12
LSM11-201ENST00000286307 AKNAD1Q5T1N1 836 aa22.05■■□□□ 1.12
LSM11-201ENST00000286307 KIF22Q14807 665 aa22.05■■□□□ 1.12
LSM11-201ENST00000286307 RBM25P49756 843 aaKnown RBP22.04■■□□□ 1.12
LSM11-201ENST00000286307 TCOF1Q13428 1488 aaKnown RBP22.04■■□□□ 1.12
LSM11-201ENST00000286307 IL13P35225 146 aa22.04■■□□□ 1.12
LSM11-201ENST00000286307 G2E3Q7L622 706 aa22.04■■□□□ 1.12
LSM11-201ENST00000286307 RXRAP19793 462 aa22.04■■□□□ 1.12
LSM11-201ENST00000286307 FCHSD1Q86WN1 690 aa22.04■■□□□ 1.12
LSM11-201ENST00000286307 EYA2O00167 538 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 KLHDC4Q8TBB5 520 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 UGGT1Q9NYU2 1555 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 VAMP4O75379 141 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 AFMP43652 599 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 XAGE2Q96GT9 111 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 ZNF496Q96IT1 587 aaPredicted RBP22.03■■□□□ 1.12
LSM11-201ENST00000286307 PYM1Q9BRP8 204 aaKnown RBP22.03■■□□□ 1.12
LSM11-201ENST00000286307 HOMER2Q9NSB8 354 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 SYCE3A1L190 88 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 CPXCR1Q8N123 301 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 COMMD10Q9Y6G5 202 aa22.03■■□□□ 1.12
LSM11-201ENST00000286307 MYCLP12524 364 aaPredicted RBP22.02■■□□□ 1.12
LSM11-201ENST00000286307 SAMD9Q5K651 1589 aa22.02■■□□□ 1.12
LSM11-201ENST00000286307 NUCB1Q02818 461 aa22.02■■□□□ 1.12
LSM11-201ENST00000286307 POLR3AO14802 1390 aaPredicted RBP22.02■■□□□ 1.11
LSM11-201ENST00000286307 MYO5CQ9NQX4 1742 aa22.02■■□□□ 1.11
LSM11-201ENST00000286307 SULF1Q8IWU6 871 aa22.02■■□□□ 1.11
LSM11-201ENST00000286307 GINS2Q9Y248 185 aa22.02■■□□□ 1.11
LSM11-201ENST00000286307 IGHDP01880 384 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 USPL1Q5W0Q7 1092 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 NOP56O00567 594 aaKnown RBP22.01■■□□□ 1.11
LSM11-201ENST00000286307 USP48Q86UV5 1035 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 CIZ1Q9ULV3 898 aaPredicted RBP22.01■■□□□ 1.11
LSM11-201ENST00000286307 CFAP43Q8NDM7 1665 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 ZBED4O75132 1171 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 KRT13P13646 458 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 KCNQ4P56696 695 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 FAM13AO94988 1023 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 SEPT12Q8IYM1 358 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 NLGN1Q8N2Q7 840 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 PODXL2Q9NZ53 605 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 KIAA0232Q92628 1395 aa22.01■■□□□ 1.11
LSM11-201ENST00000286307 DNMT1P26358 1616 aaKnown RBP22■■□□□ 1.11
LSM11-201ENST00000286307 FAM193AP78312 1265 aa22■■□□□ 1.11
LSM11-201ENST00000286307 IQCEQ6IPM2 695 aa22■■□□□ 1.11
LSM11-201ENST00000286307 PAGR1Q9BTK6 254 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms