RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 RAI14Q9P0K7 980 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 ZBTB1Q9Y2K1 713 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 HEG1Q9ULI3 1381 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 ATP6V1AP38606 617 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 ZKSCAN3Q9BRR0 538 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 MYL10Q9BUA6 226 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 MEGF6O75095 1541 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 ZNF165P49910 485 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 TYRO3Q06418 890 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 SCRN1Q12765 414 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 LEO1Q8WVC0 666 aaPredicted RBP13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 JAG2Q9Y219 1238 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 ERVV-2B6SEH9 535 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 OSBP2Q969R2 916 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 GJB4Q9NTQ9 266 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 RPAP1Q9BWH6 1393 aaPredicted RBP13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 M0R2C6 588 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 MARCKSP29966 332 aaPredicted RBP13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 NAPBQ9H115 298 aa13.9□□□□□ -0.18
SLC13A3-201ENST00000279027 H7C1W4 665 aa13.89□□□□□ -0.19
SLC13A3-201ENST00000279027 GTF3C6Q969F1 213 aa13.89□□□□□ -0.19
SLC13A3-201ENST00000279027 GPAA1O43292 621 aa13.89□□□□□ -0.19
SLC13A3-201ENST00000279027 FOXO4P98177 505 aa13.89□□□□□ -0.19
SLC13A3-201ENST00000279027 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
SLC13A3-201ENST00000279027 SCARF1Q14162 830 aa13.89□□□□□ -0.19
SLC13A3-201ENST00000279027 DHX16O60231 1041 aaKnown RBP13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 NR1I2O75469 434 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 RFX5P48382 616 aaPredicted RBP13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 MAST3O60307 1309 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 ERICH2A1L162 156 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 SMC2O95347 1197 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 NCOA7Q8NI08 942 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 A0A1B0GVL5 298 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 B4E1Z4 1266 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 MCM5P33992 734 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 STOX1Q6ZVD7 989 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 NIP7Q9Y221 180 aaKnown RBP eCLIP13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 NCAPD2Q15021 1401 aa13.88□□□□□ -0.19
SLC13A3-201ENST00000279027 IFIT3O14879 490 aaKnown RBP13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 IGHMBP2P38935 993 aaKnown RBP13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 HMGN5P82970 282 aaKnown RBP13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 TSC1Q92574 1164 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 HELLSQ9NRZ9 838 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 FGAP02671 866 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 ATG9AQ7Z3C6 839 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 PUS7LQ9H0K6 701 aaKnown RBP13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 NOL7Q9UMY1 257 aaKnown RBP13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 HSP90AA4PQ58FG1 418 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 MAGEB6Q8N7X4 407 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 CCDC186Q7Z3E2 898 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 CARD10Q9BWT7 1032 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 INCENPQ9NQS7 918 aa13.87□□□□□ -0.19
SLC13A3-201ENST00000279027 ZSCAN25Q6NSZ9 544 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 PTGS1P23219 599 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 PHKA1P46020 1223 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 TMEM67Q5HYA8 995 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 PHKBQ93100 1093 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 DDX19AQ9NUU7 478 aaKnown RBP13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 PXDNLA1KZ92 1463 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 ST3GAL1Q11201 340 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 DDB1Q16531 1140 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 USP28Q96RU2 1077 aa13.86□□□□□ -0.19
SLC13A3-201ENST00000279027 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 METAP2P50579 478 aaKnown RBP eCLIP13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 FAM200AQ8TCP9 573 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 SLC5A1P13866 664 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 MAP3K12Q12852 859 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 SEC31BQ9NQW1 1179 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 TPD52L1Q16890 204 aaPredicted RBP13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 ZMYM1Q5SVZ6 1142 aa13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 CMTR1Q8N1G2 835 aaKnown RBP13.85□□□□□ -0.19
SLC13A3-201ENST00000279027 ZNF609O15014 1411 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 MBD4O95243 580 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 ADD1P35611 737 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 SAFBQ15424 915 aaKnown RBP eCLIP13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 C16orf45Q96MC5 204 aaPredicted RBP13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 ZSCAN16Q9H4T2 348 aaPredicted RBP13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 ZNF532Q9HCE3 1301 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 TNS3Q68CZ2 1445 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 OFD1O75665 1012 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 APPBP2Q92624 585 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 ALG1Q9BT22 464 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 TRMT1Q9NXH9 659 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 CLIP2Q9UDT6 1046 aa13.84□□□□□ -0.19
SLC13A3-201ENST00000279027 TPM2P07951 284 aa13.83□□□□□ -0.19
SLC13A3-201ENST00000279027 NOLC1Q14978 699 aaKnown RBP eCLIP13.83□□□□□ -0.19
SLC13A3-201ENST00000279027 RABL6Q3YEC7 729 aaPredicted RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms