RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ZSCAN16Q9H4T2 348 aaPredicted RBP15.82■□□□□ 0.12
NPC1-201ENST00000269228 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
NPC1-201ENST00000269228 IGSF1Q8N6C5 1336 aa15.82■□□□□ 0.12
NPC1-201ENST00000269228 DDX19AQ9NUU7 478 aaKnown RBP15.82■□□□□ 0.12
NPC1-201ENST00000269228 SAMM50Q9Y512 469 aa15.82■□□□□ 0.12
NPC1-201ENST00000269228 H0YIN7 160 aa15.82■□□□□ 0.12
NPC1-201ENST00000269228 TEX11Q8IYF3 940 aa15.82■□□□□ 0.12
NPC1-201ENST00000269228 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
NPC1-201ENST00000269228 ARAP3Q8WWN8 1544 aa15.82■□□□□ 0.12
NPC1-201ENST00000269228 CTAGE5O15320 804 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 AK2P54819 239 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 TSG101Q99816 390 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 ASAP1Q9ULH1 1129 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 NDUFB9Q9Y6M9 179 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 MAP3K4Q9Y6R4 1608 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.81■□□□□ 0.121e-7■■□□□ 11.5
NPC1-201ENST00000269228 ARHGAP31Q2M1Z3 1444 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 BAG6P46379 1132 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 DPP8Q6V1X1 898 aaPredicted RBP15.81■□□□□ 0.12
NPC1-201ENST00000269228 DHX32Q7L7V1 743 aaKnown RBP15.81■□□□□ 0.12
NPC1-201ENST00000269228 CCDC148Q8NFR7 591 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 LPIN2Q92539 896 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 TRPC5Q9UL62 973 aaPredicted RBP15.81■□□□□ 0.12
NPC1-201ENST00000269228 GJA3Q9Y6H8 435 aa15.81■□□□□ 0.12
NPC1-201ENST00000269228 SAP30BPQ9UHR5 308 aaKnown RBP15.81■□□□□ 0.12
NPC1-201ENST00000269228 WDR17Q8IZU2 1322 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 ZKSCAN3Q9BRR0 538 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 ARMT1Q9H993 441 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 RXRAP19793 462 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 NAPAP54920 295 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 FAM182BQ5T319 152 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 USP44Q9H0E7 712 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 LIG1P18858 919 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 SIK1P57059 783 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 ERBB3P21860 1342 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 GRM1Q13255 1194 aa15.8■□□□□ 0.12
NPC1-201ENST00000269228 A2ML1A8K2U0 1454 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 CPA1P15085 419 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 MSL1Q68DK7 614 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 TTC6Q86TZ1 520 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 PAF1Q8N7H5 531 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 USP26Q9BXU7 913 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 SEC24BO95487 1268 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 BRINP3Q76B58 766 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 CALM1P0DP23 149 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 CALM2P0DP24 149 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 CALM3P0DP25 149 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 ISM2Q6H9L7 571 aa15.79■□□□□ 0.12
NPC1-201ENST00000269228 CCDC102BQ68D86 513 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 NF2P35240 595 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 SYNMO15061 1565 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 RTL1A6NKG5 1358 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 RTL9Q8NET4 1388 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 EPB41L2O43491 1005 aaKnown RBP15.78■□□□□ 0.12
NPC1-201ENST00000269228 RDXP35241 583 aaKnown RBP15.78■□□□□ 0.12
NPC1-201ENST00000269228 RPS8P62241 208 aaKnown RBP15.78■□□□□ 0.12
NPC1-201ENST00000269228 AMPD3Q01432 767 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 TRAF1Q13077 416 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 TXLNBQ8N3L3 684 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 FAM227BQ96M60 508 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 UBE2HP62256 183 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 FKBP15Q5T1M5 1219 aa15.78■□□□□ 0.12
NPC1-201ENST00000269228 LARGE2Q8N3Y3 721 aa15.77■□□□□ 0.12
NPC1-201ENST00000269228 APPBP2Q92624 585 aa15.77■□□□□ 0.12
NPC1-201ENST00000269228 KIF20AO95235 890 aa15.77■□□□□ 0.12
NPC1-201ENST00000269228 MROH5Q6ZUA9 1318 aa15.77■□□□□ 0.12
NPC1-201ENST00000269228 CTSWP56202 376 aa15.77■□□□□ 0.11
NPC1-201ENST00000269228 CNPY2Q9Y2B0 182 aa15.77■□□□□ 0.11
NPC1-201ENST00000269228 ABCC4O15439 1325 aa15.77■□□□□ 0.11
NPC1-201ENST00000269228 GPAA1O43292 621 aa15.77■□□□□ 0.11
NPC1-201ENST00000269228 PROSER3Q2NL68 480 aa15.77■□□□□ 0.11
NPC1-201ENST00000269228 ACBD3Q9H3P7 528 aa15.77■□□□□ 0.11
NPC1-201ENST00000269228 RBM27Q9P2N5 1060 aaKnown RBP15.77■□□□□ 0.11
NPC1-201ENST00000269228 IQGAP3Q86VI3 1631 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 KDRP35968 1356 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 HSP90B2PQ58FF3 399 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 ZNF397Q8NF99 534 aaPredicted RBP15.76■□□□□ 0.11
NPC1-201ENST00000269228 WDR66Q8TBY9 1149 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 SNX21Q969T3 373 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 B4E1Z4 1266 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 ZAP70P43403 619 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 KBTBD3Q8NAB2 608 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 SMARCC2Q8TAQ2 1214 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 SFPQP23246 707 aaKnown RBP eCLIP15.76■□□□□ 0.11
NPC1-201ENST00000269228 LMOD1P29536 600 aaPredicted RBP15.76■□□□□ 0.11
NPC1-201ENST00000269228 BEND3Q5T5X7 828 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 CCDC181Q5TID7 509 aa15.76■□□□□ 0.11
NPC1-201ENST00000269228 RRP36Q96EU6 259 aaKnown RBP15.76■□□□□ 0.11
NPC1-201ENST00000269228 MARCKSP29966 332 aaPredicted RBP15.75■□□□□ 0.11
NPC1-201ENST00000269228 SPATA5Q8NB90 893 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 AATFQ9NY61 560 aaKnown RBP eCLIP15.75■□□□□ 0.11
NPC1-201ENST00000269228 ERBB4Q15303 1308 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 SYKP43405 635 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 CRKLP46109 303 aaKnown RBP15.75■□□□□ 0.11
NPC1-201ENST00000269228 C6orf50Q9HD87 102 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms