RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 FAM200AQ8TCP9 573 aa17.08■□□□□ 0.33
NID1-201ENST00000264187 KCNG4Q8TDN1 519 aa17.08■□□□□ 0.33
NID1-201ENST00000264187 HMG20BQ9P0W2 317 aa17.08■□□□□ 0.33
NID1-201ENST00000264187 SAMD15Q9P1V8 674 aa17.08■□□□□ 0.33
NID1-201ENST00000264187 TTC36A6NLP5 189 aa17.08■□□□□ 0.32
NID1-201ENST00000264187 RAPGEF1Q13905 1077 aa17.08■□□□□ 0.32
NID1-201ENST00000264187 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.32
NID1-201ENST00000264187 MPHOSPH6Q99547 160 aaKnown RBP17.08■□□□□ 0.32
NID1-201ENST00000264187 PSMD6Q15008 389 aa17.08■□□□□ 0.32
NID1-201ENST00000264187 LMBR1Q8WVP7 490 aa17.08■□□□□ 0.32
NID1-201ENST00000264187 HFM1A2PYH4 1435 aa17.08■□□□□ 0.32
NID1-201ENST00000264187 CAVIN2O95810 425 aa17.08■□□□□ 0.32
NID1-201ENST00000264187 RABEP2Q9H5N1 569 aa17.08■□□□□ 0.32
NID1-201ENST00000264187 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
NID1-201ENST00000264187 SETDB1Q15047 1291 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 SLC52A1Q9NWF4 448 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
NID1-201ENST00000264187 CFTRP13569 1480 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 KRT83P78385 493 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 SPAG1Q07617 926 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 NEK11Q8NG66 645 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 GTF3C6Q969F1 213 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 HPDP32754 393 aaPredicted RBP17.07■□□□□ 0.32
NID1-201ENST00000264187 RNASE9P60153 205 aaKnown RBP17.07■□□□□ 0.32
NID1-201ENST00000264187 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 RTL1A6NKG5 1358 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 SF3A3Q12874 501 aaKnown RBP eCLIP17.07■□□□□ 0.323e-6■■■■□ 24.7
NID1-201ENST00000264187 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
NID1-201ENST00000264187 TNNI2P48788 182 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 NBPF11Q86T75 865 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 RBM8AQ9Y5S9 174 aaKnown RBP17.06■□□□□ 0.32
NID1-201ENST00000264187 EXOC5O00471 708 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 VIMP08670 466 aaKnown RBP17.06■□□□□ 0.32
NID1-201ENST00000264187 HSPA1LP34931 641 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 KRT23Q9C075 422 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
NID1-201ENST00000264187 MCM7P33993 719 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 DCAF17Q5H9S7 520 aaPredicted RBP17.06■□□□□ 0.32
NID1-201ENST00000264187 ESR2Q92731 530 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 NGLY1Q96IV0 654 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 ERCC3P19447 782 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 SDSP20132 328 aa17.06■□□□□ 0.32
NID1-201ENST00000264187 RFC4P35249 363 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 RXRAP19793 462 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 IFNKQ9P0W0 207 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 TAF12Q16514 161 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 NBPF5PQ86XG9 351 aaPredicted RBP17.05■□□□□ 0.32
NID1-201ENST00000264187 MIPOL1Q8TD10 442 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 STMN2Q93045 179 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 PKD2L1Q9P0L9 805 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 PTPRCP08575 1304 aa17.05■□□□□ 0.32
NID1-201ENST00000264187 GMNNO75496 209 aa17.04■□□□□ 0.32
NID1-201ENST00000264187 HARSP12081 509 aaKnown RBP17.04■□□□□ 0.32
NID1-201ENST00000264187 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
NID1-201ENST00000264187 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
NID1-201ENST00000264187 CRCPO75575 148 aa17.04■□□□□ 0.32
NID1-201ENST00000264187 ATP2A2P16615 1042 aaKnown RBP17.04■□□□□ 0.32
NID1-201ENST00000264187 INTS8Q75QN2 995 aaKnown RBP17.04■□□□□ 0.32
NID1-201ENST00000264187 PPP1R12CQ9BZL4 782 aa17.04■□□□□ 0.32
NID1-201ENST00000264187 NAIPQ13075 1403 aa17.04■□□□□ 0.32
NID1-201ENST00000264187 PRIM1P49642 420 aaKnown RBP17.04■□□□□ 0.32
NID1-201ENST00000264187 VAV2P52735 878 aa17.04■□□□□ 0.32
NID1-201ENST00000264187 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
NID1-201ENST00000264187 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.04■□□□□ 0.322e-6■■□□□ 13.2
NID1-201ENST00000264187 MTRF1LQ9UGC7 380 aaKnown RBP17.04■□□□□ 0.32
NID1-201ENST00000264187 XRCC6P12956 609 aaKnown RBP eCLIP17.04■□□□□ 0.32
NID1-201ENST00000264187 PPFIBP2Q8ND30 876 aa17.04■□□□□ 0.32
NID1-201ENST00000264187 RFC1P35251 1148 aaPredicted RBP17.03■□□□□ 0.32
NID1-201ENST00000264187 CALCOCO2Q13137 446 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 INF2Q27J81 1249 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 HAUS7Q99871 368 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 MAK16Q9BXY0 300 aaKnown RBP17.03■□□□□ 0.32
NID1-201ENST00000264187 SPTLC2O15270 562 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.321e-15■■□□□ 11.5
NID1-201ENST00000264187 GSTO1P78417 241 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 TYRO3Q06418 890 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 PPP2R5DQ14738 602 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
NID1-201ENST00000264187 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 KIAA1524Q8TCG1 905 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 IGF1RP08069 1367 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
NID1-201ENST00000264187 CEP85LQ5SZL2 805 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 SLC9C2Q5TAH2 1124 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 GBP6Q6ZN66 633 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 GPIHBP1Q8IV16 184 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 FAM76AQ8TAV0 307 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 CCT6BQ92526 530 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 TRIM75PA6NK02 468 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 UQCRFS1P1P0C7P4 283 aa17.03■□□□□ 0.32
NID1-201ENST00000264187 PPP2R5CQ13362 524 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms