RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 AK2P54819 239 aa21.21■□□□□ 0.99
SSB-201ENST00000260956 TGFB2P61812 414 aa21.21■□□□□ 0.99
SSB-201ENST00000260956 HSP90AB3PQ58FF7 597 aa21.21■□□□□ 0.99
SSB-201ENST00000260956 C3orf67Q6ZVT6 689 aa21.21■□□□□ 0.99
SSB-201ENST00000260956 ZNF589Q86UQ0 364 aaPredicted RBP21.21■□□□□ 0.99
SSB-201ENST00000260956 LMBRD1Q9NUN5 540 aa21.21■□□□□ 0.99
SSB-201ENST00000260956 RIC1Q4ADV7 1423 aa21.21■□□□□ 0.99
SSB-201ENST00000260956 PARP10Q53GL7 1025 aa21.21■□□□□ 0.99
SSB-201ENST00000260956 PRPF40BQ6NWY9 871 aaKnown RBP21.21■□□□□ 0.99
SSB-201ENST00000260956 CDHR2Q9BYE9 1310 aa21.2■□□□□ 0.98
SSB-201ENST00000260956 CSF1RP07333 972 aa21.2■□□□□ 0.98
SSB-201ENST00000260956 YBX3P16989 372 aaKnown RBP eCLIP21.2■□□□□ 0.98
SSB-201ENST00000260956 CREB3L3Q68CJ9 461 aa21.2■□□□□ 0.98
SSB-201ENST00000260956 BRPF3Q9ULD4 1205 aa21.2■□□□□ 0.98
SSB-201ENST00000260956 NPHP1O15259 732 aa21.19■□□□□ 0.98
SSB-201ENST00000260956 COL9A3Q14050 684 aaPredicted RBP21.19■□□□□ 0.98
SSB-201ENST00000260956 KLHL40Q2TBA0 621 aa21.19■□□□□ 0.98
SSB-201ENST00000260956 LRRC24Q50LG9 513 aa21.19■□□□□ 0.98
SSB-201ENST00000260956 TICAM2Q86XR7 235 aa21.19■□□□□ 0.98
SSB-201ENST00000260956 UTP14AQ9BVJ6 771 aaKnown RBP21.19■□□□□ 0.98
SSB-201ENST00000260956 GZF1Q9H116 711 aaPredicted RBP21.19■□□□□ 0.98
SSB-201ENST00000260956 FBXO3Q9UK99 471 aa21.19■□□□□ 0.98
SSB-201ENST00000260956 SLC27A2O14975 620 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 TAF5LO75529 589 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 TSGA10IPQ3SY00 556 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 VPS53Q5VIR6 699 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 FAM89AQ96GI7 184 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 CPA1P15085 419 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 ST5P78524 1137 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 ST3GAL1Q11201 340 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 NOL8Q76FK4 1167 aaKnown RBP21.18■□□□□ 0.98
SSB-201ENST00000260956 ZBTB38Q8NAP3 1195 aaPredicted RBP21.18■□□□□ 0.98
SSB-201ENST00000260956 ZNF594Q96JF6 807 aaPredicted RBP21.18■□□□□ 0.98
SSB-201ENST00000260956 NYXQ9GZU5 481 aa21.18■□□□□ 0.98
SSB-201ENST00000260956 TRMT112Q9UI30 125 aaKnown RBP21.18■□□□□ 0.98
SSB-201ENST00000260956 KLRG2A4D1S0 409 aaPredicted RBP21.17■□□□□ 0.98
SSB-201ENST00000260956 LARGE1O95461 756 aa21.17■□□□□ 0.98
SSB-201ENST00000260956 HCLS1P14317 486 aaPredicted RBP21.17■□□□□ 0.98
SSB-201ENST00000260956 CASTP20810 708 aaKnown RBP21.17■□□□□ 0.98
SSB-201ENST00000260956 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
SSB-201ENST00000260956 L1TD1Q5T7N2 865 aaKnown RBP21.17■□□□□ 0.98
SSB-201ENST00000260956 C2CD5Q86YS7 1000 aa21.17■□□□□ 0.98
SSB-201ENST00000260956 PUS3Q9BZE2 481 aaKnown RBP21.17■□□□□ 0.98
SSB-201ENST00000260956 ISY1Q9ULR0 285 aaKnown RBP21.17■□□□□ 0.98
SSB-201ENST00000260956 LIMCH1Q9UPQ0 1083 aa21.17■□□□□ 0.98
SSB-201ENST00000260956 TAF6LQ9Y6J9 622 aa21.17■□□□□ 0.98
SSB-201ENST00000260956 SH3TC1Q8TE82 1336 aa21.17■□□□□ 0.98
SSB-201ENST00000260956 KBTBD3Q8NAB2 608 aa21.16■□□□□ 0.98
SSB-201ENST00000260956 JAKMIP1Q96N16 626 aaKnown RBP21.16■□□□□ 0.98
SSB-201ENST00000260956 NDUFB9Q9Y6M9 179 aa21.16■□□□□ 0.98
SSB-201ENST00000260956 TNRC6CQ9HCJ0 1690 aaKnown RBP21.16■□□□□ 0.98
SSB-201ENST00000260956 LAMB2P55268 1798 aa21.16■□□□□ 0.98
SSB-201ENST00000260956 GOLGA6L22H0YM25 854 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 CHGBP05060 677 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 SRGNP10124 158 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.15■□□□□ 0.98
SSB-201ENST00000260956 ARAP2Q8WZ64 1704 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 XRCC6P12956 609 aaKnown RBP eCLIP21.15■□□□□ 0.985e-6■□□□□ 10.3
SSB-201ENST00000260956 PDE6BP35913 854 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 SLC10A5Q5PT55 438 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 MCTP1Q6DN14 999 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 CHAMP1Q96JM3 812 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 ALDH8A1Q9H2A2 487 aaPredicted RBP21.15■□□□□ 0.98
SSB-201ENST00000260956 CHMP3Q9Y3E7 222 aa21.15■□□□□ 0.98
SSB-201ENST00000260956 COL11A2P13942 1736 aaPredicted RBP21.14■□□□□ 0.98
SSB-201ENST00000260956 LAMA4Q16363 1823 aa21.14■□□□□ 0.97
SSB-201ENST00000260956 GOLGA6L3A6NEY3 463 aa21.14■□□□□ 0.97
SSB-201ENST00000260956 H0YIN7 160 aa21.13■□□□□ 0.97
SSB-201ENST00000260956 CRY2Q49AN0 593 aa21.13■□□□□ 0.97
SSB-201ENST00000260956 GAS2L3Q86XJ1 694 aa21.13■□□□□ 0.97
SSB-201ENST00000260956 AKAP11Q9UKA4 1901 aa21.13■□□□□ 0.97
SSB-201ENST00000260956 PDRG1Q9NUG6 133 aa21.12■□□□□ 0.97
SSB-201ENST00000260956 HMG20BQ9P0W2 317 aa21.12■□□□□ 0.97
SSB-201ENST00000260956 PIM2Q9P1W9 311 aa21.12■□□□□ 0.97
SSB-201ENST00000260956 CYP46A1Q9Y6A2 500 aa21.12■□□□□ 0.97
SSB-201ENST00000260956 DDX60Q8IY21 1712 aaKnown RBP21.12■□□□□ 0.97
SSB-201ENST00000260956 A0A1B0GUL7 405 aa21.12■□□□□ 0.97
SSB-201ENST00000260956 TIMM10P62072 90 aa21.12■□□□□ 0.97
SSB-201ENST00000260956 GPR162Q16538 588 aa21.12■□□□□ 0.97
SSB-201ENST00000260956 SLC51AQ86UW1 340 aa21.12■□□□□ 0.97
SSB-201ENST00000260956 BRCA1P38398 1863 aaKnown RBP21.11■□□□□ 0.97
SSB-201ENST00000260956 MYH7P12883 1935 aa21.11■□□□□ 0.97
SSB-201ENST00000260956 ZKSCAN1P17029 563 aaPredicted RBP21.11■□□□□ 0.97
SSB-201ENST00000260956 DDX46Q7L014 1031 aaKnown RBP21.11■□□□□ 0.97
SSB-201ENST00000260956 ZNF622Q969S3 477 aaKnown RBP eCLIP21.11■□□□□ 0.979e-11■■□□□ 13.2
SSB-201ENST00000260956 DNAJC2Q99543 621 aaKnown RBP21.11■□□□□ 0.97
SSB-201ENST00000260956 BCS1LQ9Y276 419 aa21.11■□□□□ 0.97
SSB-201ENST00000260956 GPT2Q8TD30 523 aa21.1■□□□□ 0.97
SSB-201ENST00000260956 SEC62Q99442 399 aaKnown RBP21.1■□□□□ 0.97
SSB-201ENST00000260956 SH2B1Q9NRF2 756 aaPredicted RBP21.1■□□□□ 0.97
SSB-201ENST00000260956 PAG1Q9NWQ8 432 aa21.1■□□□□ 0.97
SSB-201ENST00000260956 IRS4O14654 1257 aaPredicted RBP21.09■□□□□ 0.97
SSB-201ENST00000260956 ZMYM1Q5SVZ6 1142 aa21.09■□□□□ 0.97
SSB-201ENST00000260956 TTLL11Q8NHH1 800 aa21.09■□□□□ 0.97
SSB-201ENST00000260956 ZSCAN31Q96LW9 406 aaPredicted RBP21.09■□□□□ 0.97
SSB-201ENST00000260956 CCDC129Q6ZRS4 1044 aa21.09■□□□□ 0.97
SSB-201ENST00000260956 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
SSB-201ENST00000260956 RIPOR2Q9Y4F9 1068 aa21.09■□□□□ 0.97
SSB-201ENST00000260956 DDX49Q9Y6V7 483 aaKnown RBP21.09■□□□□ 0.97
SSB-201ENST00000260956 WDR33Q9C0J8 1336 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1068.6 ms