RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 USP44Q9H0E7 712 aa17.18■□□□□ 0.34
KCTD3-201ENST00000259154 STX17P56962 302 aa17.18■□□□□ 0.34
KCTD3-201ENST00000259154 GSDMDP57764 484 aa17.18■□□□□ 0.34
KCTD3-201ENST00000259154 ENOX2Q16206 610 aaKnown RBP17.18■□□□□ 0.34
KCTD3-201ENST00000259154 CNNM3Q8NE01 707 aa17.18■□□□□ 0.34
KCTD3-201ENST00000259154 LEO1Q8WVC0 666 aaPredicted RBP17.18■□□□□ 0.34
KCTD3-201ENST00000259154 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
KCTD3-201ENST00000259154 ITSN1Q15811 1721 aa17.18■□□□□ 0.34
KCTD3-201ENST00000259154 ATP2C2O75185 946 aa17.17■□□□□ 0.34
KCTD3-201ENST00000259154 IRX3P78415 501 aaPredicted RBP17.17■□□□□ 0.34
KCTD3-201ENST00000259154 FILIP1LQ4L180 1135 aa17.17■□□□□ 0.34
KCTD3-201ENST00000259154 ORC3Q9UBD5 711 aaPredicted RBP17.17■□□□□ 0.34
KCTD3-201ENST00000259154 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
KCTD3-201ENST00000259154 ZSCAN12O43309 604 aa17.17■□□□□ 0.34
KCTD3-201ENST00000259154 NCBP1Q09161 790 aaKnown RBP17.17■□□□□ 0.34
KCTD3-201ENST00000259154 CRACR2AQ9BSW2 395 aa17.17■□□□□ 0.34
KCTD3-201ENST00000259154 DHX8Q14562 1220 aaKnown RBP17.17■□□□□ 0.34
KCTD3-201ENST00000259154 MTMR6Q9Y217 621 aa17.17■□□□□ 0.34
KCTD3-201ENST00000259154 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 ERO1AQ96HE7 468 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 RAD21O60216 631 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 DRC1Q96MC2 740 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 EPC1Q9H2F5 836 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 DIP2AQ14689 1571 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 MARCH6O60337 910 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 NEMFO60524 1076 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 LONRF3Q496Y0 759 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
KCTD3-201ENST00000259154 ZCCHC17Q9NP64 241 aaKnown RBP17.16■□□□□ 0.34
KCTD3-201ENST00000259154 SGSM2O43147 1006 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 CBFA2T2O43439 604 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 MICALL1Q8N3F8 863 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 MYD88Q99836 296 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.15■□□□□ 0.34
KCTD3-201ENST00000259154 KIF5CO60282 957 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
KCTD3-201ENST00000259154 CHRNA2Q15822 529 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 KCNH5Q8NCM2 988 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 EVI5LQ96CN4 794 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
KCTD3-201ENST00000259154 ZNF710Q8N1W2 664 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
KCTD3-201ENST00000259154 FLT4P35916 1363 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 SF3A3Q12874 501 aaKnown RBP eCLIP17.15■□□□□ 0.34
KCTD3-201ENST00000259154 PRDM4Q9UKN5 801 aa17.15■□□□□ 0.34
KCTD3-201ENST00000259154 KRT32Q14532 448 aa17.14■□□□□ 0.33
KCTD3-201ENST00000259154 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
KCTD3-201ENST00000259154 RASSF4Q9H2L5 321 aa17.14■□□□□ 0.33
KCTD3-201ENST00000259154 KIAA0754O94854 1291 aa17.14■□□□□ 0.33
KCTD3-201ENST00000259154 GABPB1Q06547 395 aaPredicted RBP17.14■□□□□ 0.33
KCTD3-201ENST00000259154 PLEKHA4Q9H4M7 779 aa17.14■□□□□ 0.33
KCTD3-201ENST00000259154 SOS1Q07889 1333 aaPredicted RBP17.14■□□□□ 0.33
KCTD3-201ENST00000259154 DHX16O60231 1041 aaKnown RBP17.14■□□□□ 0.33
KCTD3-201ENST00000259154 RNF187Q5TA31 235 aaPredicted RBP17.14■□□□□ 0.33
KCTD3-201ENST00000259154 VPS53Q5VIR6 699 aa17.14■□□□□ 0.33
KCTD3-201ENST00000259154 FBXO38Q6PIJ6 1188 aa17.14■□□□□ 0.33
KCTD3-201ENST00000259154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.14■□□□□ 0.33
KCTD3-201ENST00000259154 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 OAS2P29728 719 aaKnown RBP17.13■□□□□ 0.33
KCTD3-201ENST00000259154 AFMP43652 599 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 CABP4P57796 275 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 SMARCE1Q969G3 411 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 MRVI1Q9Y6F6 885 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 KIAA0232Q92628 1395 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 USP27XA6NNY8 438 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
KCTD3-201ENST00000259154 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
KCTD3-201ENST00000259154 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 RAD50Q92878 1312 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 CTAGE5O15320 804 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 UBE3BQ7Z3V4 1068 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 CAPZA3Q96KX2 299 aa17.13■□□□□ 0.33
KCTD3-201ENST00000259154 ERICH2A1L162 156 aa17.12■□□□□ 0.33
KCTD3-201ENST00000259154 XPO4Q9C0E2 1151 aaKnown RBP17.12■□□□□ 0.33
KCTD3-201ENST00000259154 HSPA4P34932 840 aa17.12■□□□□ 0.33
KCTD3-201ENST00000259154 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
KCTD3-201ENST00000259154 TXLNBQ8N3L3 684 aa17.12■□□□□ 0.33
KCTD3-201ENST00000259154 DESI2Q9BSY9 194 aa17.12■□□□□ 0.33
KCTD3-201ENST00000259154 PTPDC1A2A3K4 754 aa17.12■□□□□ 0.33
KCTD3-201ENST00000259154 SYKP43405 635 aa17.12■□□□□ 0.33
KCTD3-201ENST00000259154 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
KCTD3-201ENST00000259154 KIAA1328Q86T90 577 aa17.11■□□□□ 0.33
KCTD3-201ENST00000259154 PLEKHG1Q9ULL1 1385 aa17.11■□□□□ 0.33
KCTD3-201ENST00000259154 PPP2R3AQ06190 1150 aa17.11■□□□□ 0.33
KCTD3-201ENST00000259154 SBNO1A3KN83 1393 aa17.11■□□□□ 0.33
KCTD3-201ENST00000259154 TTC39AQ5SRH9 613 aa17.11■□□□□ 0.33
KCTD3-201ENST00000259154 NUP88Q99567 741 aaPredicted RBP17.11■□□□□ 0.33
KCTD3-201ENST00000259154 CABLES1Q8TDN4 633 aa17.1■□□□□ 0.33
KCTD3-201ENST00000259154 CLSTN2Q9H4D0 955 aa17.1■□□□□ 0.33
KCTD3-201ENST00000259154 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
KCTD3-201ENST00000259154 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
KCTD3-201ENST00000259154 HNRNPH2P55795 449 aaKnown RBP17.1■□□□□ 0.33
KCTD3-201ENST00000259154 ZSCAN26Q16670 478 aa17.1■□□□□ 0.33
KCTD3-201ENST00000259154 C11orf57Q6ZUT1 292 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms