RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 VGLL2Q8N8G2 317 aa25.72■■□□□ 1.71
CLN6-201ENST00000249806 PHLPP1O60346 1717 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 E7EWF7 191 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 JAK2O60674 1132 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 MCAMP43121 646 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 SYAP1Q96A49 352 aaPredicted RBP25.71■■□□□ 1.71
CLN6-201ENST00000249806 CCDC87Q9NVE4 849 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 SLIT2O94813 1529 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 LOC102724428A0A0B4J2F2 783 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 PDCP20941 246 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 SIK1P57059 783 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 SUSD4Q5VX71 490 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 FAM173BQ6P4H8 233 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 NRAPQ86VF7 1730 aa25.71■■□□□ 1.71
CLN6-201ENST00000249806 LTBP4Q8N2S1 1624 aa25.7■■□□□ 1.71
CLN6-201ENST00000249806 HMGB1P09429 215 aaKnown RBP25.7■■□□□ 1.7
CLN6-201ENST00000249806 HCLS1P14317 486 aaPredicted RBP25.7■■□□□ 1.7
CLN6-201ENST00000249806 UBE2HP62256 183 aa25.7■■□□□ 1.7
CLN6-201ENST00000249806 CCDC173Q0VFZ6 552 aa25.69■■□□□ 1.7
CLN6-201ENST00000249806 ITPK1Q13572 414 aa25.69■■□□□ 1.7
CLN6-201ENST00000249806 ANP32BQ92688 251 aaKnown RBP25.69■■□□□ 1.7
CLN6-201ENST00000249806 PUS7LQ9H0K6 701 aaKnown RBP25.69■■□□□ 1.7
CLN6-201ENST00000249806 SPATA31A5Q5VU36 1347 aa25.69■■□□□ 1.7
CLN6-201ENST00000249806 SPATA31A7Q8IWB4 1347 aa25.69■■□□□ 1.7
CLN6-201ENST00000249806 FOXP2O15409 715 aa25.69■■□□□ 1.7
CLN6-201ENST00000249806 PDE8BO95263 885 aa25.69■■□□□ 1.7
CLN6-201ENST00000249806 PPP1R9BQ96SB3 815 aa25.69■■□□□ 1.7
CLN6-201ENST00000249806 ZFYP08048 801 aaPredicted RBP25.68■■□□□ 1.7
CLN6-201ENST00000249806 EXOSC10Q01780 885 aaKnown RBP25.68■■□□□ 1.7
CLN6-201ENST00000249806 SCRN1Q12765 414 aa25.68■■□□□ 1.7
CLN6-201ENST00000249806 LRRFIP1Q32MZ4 808 aaKnown RBP25.68■■□□□ 1.7
CLN6-201ENST00000249806 CHST3Q7LGC8 479 aa25.68■■□□□ 1.7
CLN6-201ENST00000249806 HELBQ8NG08 1087 aaPredicted RBP25.68■■□□□ 1.7
CLN6-201ENST00000249806 TRIM44Q96DX7 344 aaPredicted RBP25.68■■□□□ 1.7
CLN6-201ENST00000249806 AKAP11Q9UKA4 1901 aa25.68■■□□□ 1.7
CLN6-201ENST00000249806 PIP4K2BP78356 416 aa25.68■■□□□ 1.7
CLN6-201ENST00000249806 APOBRQ0VD83 1088 aa25.67■■□□□ 1.7
CLN6-201ENST00000249806 RNF214Q8ND24 703 aa25.67■■□□□ 1.7
CLN6-201ENST00000249806 MYH14Q7Z406 1995 aaKnown RBP25.66■■□□□ 1.7
CLN6-201ENST00000249806 KCNQ2O43526 872 aa25.66■■□□□ 1.7
CLN6-201ENST00000249806 PDIA4P13667 645 aaKnown RBP25.66■■□□□ 1.7
CLN6-201ENST00000249806 APPBP2Q92624 585 aa25.66■■□□□ 1.7
CLN6-201ENST00000249806 DDX11Q96FC9 970 aa25.66■■□□□ 1.7
CLN6-201ENST00000249806 HAND2P61296 217 aa25.65■■□□□ 1.7
CLN6-201ENST00000249806 FGAP02671 866 aa25.65■■□□□ 1.7
CLN6-201ENST00000249806 CAMTA2O94983 1202 aa25.64■■□□□ 1.7
CLN6-201ENST00000249806 PHKA1P46020 1223 aa25.64■■□□□ 1.7
CLN6-201ENST00000249806 CCDC102BQ68D86 513 aa25.64■■□□□ 1.7
CLN6-201ENST00000249806 TSPY26PQ9H489 355 aa25.64■■□□□ 1.7
CLN6-201ENST00000249806 ABCC12Q96J65 1359 aa25.64■■□□□ 1.69
CLN6-201ENST00000249806 PFKFB2O60825 505 aa25.64■■□□□ 1.69
CLN6-201ENST00000249806 CSPP1Q1MSJ5 1256 aa25.64■■□□□ 1.69
CLN6-201ENST00000249806 AGXT2Q9BYV1 514 aa25.64■■□□□ 1.69
CLN6-201ENST00000249806 SEC31BQ9NQW1 1179 aa25.64■■□□□ 1.69
CLN6-201ENST00000249806 SNAP23O00161 211 aa25.63■■□□□ 1.69
CLN6-201ENST00000249806 CCDC183Q5T5S1 534 aa25.63■■□□□ 1.69
CLN6-201ENST00000249806 UTP14AQ9BVJ6 771 aaKnown RBP25.63■■□□□ 1.69
CLN6-201ENST00000249806 MYH7P12883 1935 aa25.63■■□□□ 1.69
CLN6-201ENST00000249806 NWD2Q9ULI1 1742 aa25.63■■□□□ 1.69
CLN6-201ENST00000249806 MYO5AQ9Y4I1 1855 aaKnown RBP25.63■■□□□ 1.69
CLN6-201ENST00000249806 PHF14O94880 888 aa25.63■■□□□ 1.69
CLN6-201ENST00000249806 CCT2P78371 535 aaKnown RBP25.63■■□□□ 1.69
CLN6-201ENST00000249806 TTC6Q86TZ1 520 aa25.63■■□□□ 1.69
CLN6-201ENST00000249806 ZNF512BQ96KM6 892 aaPredicted RBP25.63■■□□□ 1.69
CLN6-201ENST00000249806 GPAA1O43292 621 aa25.62■■□□□ 1.69
CLN6-201ENST00000249806 KRT85P78386 507 aa25.62■■□□□ 1.69
CLN6-201ENST00000249806 SLC9C2Q5TAH2 1124 aa25.62■■□□□ 1.69
CLN6-201ENST00000249806 PIH1D3Q9NQM4 214 aaKnown RBP25.62■■□□□ 1.69
CLN6-201ENST00000249806 BARGINQ6ZT62 677 aa25.61■■□□□ 1.69
CLN6-201ENST00000249806 TFIP11Q9UBB9 837 aaKnown RBP25.61■■□□□ 1.69
CLN6-201ENST00000249806 CTNNA3Q9UI47 895 aa25.61■■□□□ 1.69
CLN6-201ENST00000249806 NAP1L2Q9ULW6 460 aaPredicted RBP25.61■■□□□ 1.69
CLN6-201ENST00000249806 CTDNEP1O95476 244 aa25.61■■□□□ 1.69
CLN6-201ENST00000249806 IMMTQ16891 758 aaKnown RBP25.61■■□□□ 1.69
CLN6-201ENST00000249806 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.61■■□□□ 1.69
CLN6-201ENST00000249806 NIP7Q9Y221 180 aaKnown RBP eCLIP25.61■■□□□ 1.69
CLN6-201ENST00000249806 ESPNB1AK53 854 aa25.6■■□□□ 1.69
CLN6-201ENST00000249806 IDH1O75874 414 aaKnown RBP25.6■■□□□ 1.69
CLN6-201ENST00000249806 FGFR2P21802 821 aa25.6■■□□□ 1.69
CLN6-201ENST00000249806 ADD2P35612 726 aa25.6■■□□□ 1.69
CLN6-201ENST00000249806 PUM3Q15397 648 aaKnown RBP25.6■■□□□ 1.69
CLN6-201ENST00000249806 SMARCC2Q8TAQ2 1214 aa25.6■■□□□ 1.69
CLN6-201ENST00000249806 LPIN2Q92539 896 aa25.6■■□□□ 1.69
CLN6-201ENST00000249806 AK7Q96M32 723 aa25.6■■□□□ 1.69
CLN6-201ENST00000249806 NCOA5Q9HCD5 579 aaKnown RBP25.6■■□□□ 1.69
CLN6-201ENST00000249806 GPHNQ9NQX3 736 aaPredicted RBP25.6■■□□□ 1.69
CLN6-201ENST00000249806 PPFIA3O75145 1194 aa25.6■■□□□ 1.69
CLN6-201ENST00000249806 NSUN7Q8NE18 718 aaKnown RBP25.6■■□□□ 1.69
CLN6-201ENST00000249806 MROH5Q6ZUA9 1318 aa25.6■■□□□ 1.69
CLN6-201ENST00000249806 ARID4AP29374 1257 aaPredicted RBP25.59■■□□□ 1.69
CLN6-201ENST00000249806 FAM184AQ8NB25 1140 aa25.59■■□□□ 1.69
CLN6-201ENST00000249806 MPHOSPH8Q99549 860 aa25.59■■□□□ 1.69
CLN6-201ENST00000249806 PDIA3P30101 505 aaKnown RBP25.58■■□□□ 1.69
CLN6-201ENST00000249806 TTF1Q15361 905 aaPredicted RBP25.58■■□□□ 1.69
CLN6-201ENST00000249806 FAM98CQ17RN3 349 aaKnown RBP25.58■■□□□ 1.69
CLN6-201ENST00000249806 LLPHQ9BRT6 129 aaKnown RBP25.58■■□□□ 1.69
CLN6-201ENST00000249806 H3BQV1 296 aa25.57■■□□□ 1.68
CLN6-201ENST00000249806 IFFO2Q5TF58 517 aa25.57■■□□□ 1.68
CLN6-201ENST00000249806 KCNQ4P56696 695 aa25.57■■□□□ 1.68
CLN6-201ENST00000249806 PARP10Q53GL7 1025 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms