RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 GOLIM4O00461 696 aa15.37■□□□□ 0.05
CCDC117-201ENST00000249064 TPM1P09493 284 aa15.37■□□□□ 0.05
CCDC117-201ENST00000249064 CCDC144BQ3MJ40 725 aa15.37■□□□□ 0.05
CCDC117-201ENST00000249064 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
CCDC117-201ENST00000249064 IP6K1Q92551 441 aa15.37■□□□□ 0.05
CCDC117-201ENST00000249064 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
CCDC117-201ENST00000249064 HAND2P61296 217 aa15.37■□□□□ 0.05
CCDC117-201ENST00000249064 BEND3Q5T5X7 828 aa15.37■□□□□ 0.05
CCDC117-201ENST00000249064 FEZ2Q9UHY8 353 aaPredicted RBP15.37■□□□□ 0.05
CCDC117-201ENST00000249064 RRP15Q9Y3B9 282 aaKnown RBP15.37■□□□□ 0.05
CCDC117-201ENST00000249064 TBX22Q9Y458 520 aa15.37■□□□□ 0.05
CCDC117-201ENST00000249064 RNMTO43148 476 aaKnown RBP15.36■□□□□ 0.05
CCDC117-201ENST00000249064 PNMA6AP0CW24 399 aaPredicted RBP15.36■□□□□ 0.05
CCDC117-201ENST00000249064 ST5P78524 1137 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 FKBP15Q5T1M5 1219 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 BRF1Q92994 677 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 EAF2Q96CJ1 260 aaPredicted RBP15.36■□□□□ 0.05
CCDC117-201ENST00000249064 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCDC117-201ENST00000249064 AKAP4Q5JQC9 854 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 RNF187Q5TA31 235 aaPredicted RBP15.36■□□□□ 0.05
CCDC117-201ENST00000249064 SH2B1Q9NRF2 756 aaPredicted RBP15.36■□□□□ 0.05
CCDC117-201ENST00000249064 NPHP3Q7Z494 1330 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 GOLGA8FQ08AF8 430 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 GOLGA8DPQ0D2H9 430 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 KLHL10Q6JEL2 608 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 KRT28Q7Z3Y7 464 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 SMARCE1Q969G3 411 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 ARHGEF10O15013 1369 aa15.36■□□□□ 0.05
CCDC117-201ENST00000249064 ZSCAN12O43309 604 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 ATF3P18847 181 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 ME3Q16798 604 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 TICAM2Q86XR7 235 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 ZNF396Q96N95 335 aaPredicted RBP15.35■□□□□ 0.05
CCDC117-201ENST00000249064 HYPKQ9NX55 129 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 MYO5BQ9ULV0 1848 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 HIP1O00291 1037 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 AP5Z1O43299 807 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 TDO2P48775 406 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 PPP2R3AQ06190 1150 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 HINFPQ9BQA5 517 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 CFAP74Q9C0B2 1584 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 PCMTD1Q96MG8 357 aaPredicted RBP15.35■□□□□ 0.05
CCDC117-201ENST00000249064 SEC62Q99442 399 aaKnown RBP15.35■□□□□ 0.05
CCDC117-201ENST00000249064 CRACR2AQ9BSW2 395 aa15.35■□□□□ 0.05
CCDC117-201ENST00000249064 ATP2C2O75185 946 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 UBASH3AP57075 661 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 AMOTQ4VCS5 1084 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 JRKLQ9Y4A0 524 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 A0A1B0GVL5 298 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 TSR1Q2NL82 804 aaKnown RBP15.34■□□□□ 0.05
CCDC117-201ENST00000249064 ANKRD13DQ6ZTN6 518 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 RASSF8Q8NHQ8 419 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 A0A0D9SFI3 127 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 MYCBPQ99417 103 aaPredicted RBP15.34■□□□□ 0.05
CCDC117-201ENST00000249064 LSG1Q9H089 658 aaKnown RBP15.34■□□□□ 0.05
CCDC117-201ENST00000249064 IVLP07476 585 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 SLC3A2P08195 630 aaKnown RBP15.34■□□□□ 0.05
CCDC117-201ENST00000249064 TFCP2Q12800 502 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 LINS1Q8NG48 757 aa15.34■□□□□ 0.05
CCDC117-201ENST00000249064 JAK2O60674 1132 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 CDR1P51861 262 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 LMBR1LQ6UX01 489 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 PI4K2BQ8TCG2 481 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 TIMM10P62072 90 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 CTR9Q6PD62 1173 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 ANKRD20A12PQ8NF67 263 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 STAP2Q9UGK3 403 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 MTMR6Q9Y217 621 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 USP8P40818 1118 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 EVA1CP58658 441 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 CUL4AQ13619 759 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 PPFIBP1Q86W92 1011 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 CEP57Q86XR8 500 aa15.33■□□□□ 0.04
CCDC117-201ENST00000249064 LIG3P49916 1009 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 CRB1P82279 1406 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 NCOA3Q9Y6Q9 1424 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 CHGBP05060 677 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 SLFNL1Q499Z3 407 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 Q6ZUG5 572 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 LEO1Q8WVC0 666 aaPredicted RBP15.32■□□□□ 0.04
CCDC117-201ENST00000249064 TPCN1Q9ULQ1 816 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 SLC27A2O14975 620 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 ANKRD1Q15327 319 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 NEK1Q96PY6 1258 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 DBNDD2Q9BQY9 259 aa15.32■□□□□ 0.04
CCDC117-201ENST00000249064 NAP1L1P55209 391 aaKnown RBP15.31■□□□□ 0.04
CCDC117-201ENST00000249064 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
CCDC117-201ENST00000249064 GIGYF1O75420 1035 aaPredicted RBP15.31■□□□□ 0.04
CCDC117-201ENST00000249064 SSBP05455 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCDC117-201ENST00000249064 XPO4Q9C0E2 1151 aaKnown RBP15.31■□□□□ 0.04
CCDC117-201ENST00000249064 CTIFO43310 598 aaKnown RBP15.31■□□□□ 0.04
CCDC117-201ENST00000249064 IPO7O95373 1038 aaKnown RBP15.31■□□□□ 0.04
CCDC117-201ENST00000249064 ICE2Q659A1 982 aa15.3■□□□□ 0.04
CCDC117-201ENST00000249064 RALYLQ86SE5 291 aaKnown RBP15.3■□□□□ 0.04
CCDC117-201ENST00000249064 CCDC150Q8NCX0 1101 aa15.3■□□□□ 0.04
CCDC117-201ENST00000249064 PDE11AQ9HCR9 933 aa15.3■□□□□ 0.04
CCDC117-201ENST00000249064 KIF5CO60282 957 aa15.3■□□□□ 0.04
CCDC117-201ENST00000249064 C11orf57Q6ZUT1 292 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms