RNA–Protein interactions for RNA: ENST00000247829.7

TSPAN8-201, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-201ENST00000247829 LPIN3Q9BQK8 851 aa8.47□□□□□ -1.05
TSPAN8-201ENST00000247829 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
TSPAN8-201ENST00000247829 VTI1BQ9UEU0 232 aa8.47□□□□□ -1.05
TSPAN8-201ENST00000247829 EIF1AYO14602 144 aaKnown RBP8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 SCAMP3O14828 347 aaKnown RBP8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 SORBS3O60504 671 aa8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 PLA2G4EQ3MJ16 856 aa8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 COL13A1Q5TAT6 717 aaPredicted RBP8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 ZNF438Q7Z4V0 828 aa8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 ALYREFQ86V81 257 aaKnown RBP8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 SMG9Q9H0W8 520 aaKnown RBP8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
TSPAN8-201ENST00000247829 ITGB2P05107 769 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 CYP2E1P05181 493 aaPredicted RBP8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 NEFLP07196 543 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 HOXD8P13378 290 aaPredicted RBP8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 GNA15P30679 374 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 GRIK5Q16478 980 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 LDLRAD1Q5T700 205 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 GPAT2Q6NUI2 795 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 XKR5Q6UX68 686 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 C8orf37Q96NL8 207 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 DNAJC25Q9H1X3 360 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 FRRS1LQ9P0K9 344 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 CNTN3Q9P232 1028 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 USP35Q9P2H5 1018 aa8.45□□□□□ -1.06
TSPAN8-201ENST00000247829 SPDYE3A6NKU9 549 aa8.44□□□□□ -1.06
TSPAN8-201ENST00000247829 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
TSPAN8-201ENST00000247829 HDLBPQ00341 1268 aaKnown RBP8.44□□□□□ -1.06
TSPAN8-201ENST00000247829 TTC9Q92623 222 aa8.44□□□□□ -1.06
TSPAN8-201ENST00000247829 PLD4Q96BZ4 506 aa8.44□□□□□ -1.06
TSPAN8-201ENST00000247829 CPNE3O75131 537 aaKnown RBP8.43□□□□□ -1.06
TSPAN8-201ENST00000247829 GHRHP01286 108 aa8.43□□□□□ -1.06
TSPAN8-201ENST00000247829 ZC3H6P61129 1189 aaKnown RBP8.43□□□□□ -1.06
TSPAN8-201ENST00000247829 HYAL2Q12891 473 aa8.43□□□□□ -1.06
TSPAN8-201ENST00000247829 TRIM28Q13263 835 aaKnown RBP8.43□□□□□ -1.06
TSPAN8-201ENST00000247829 DMRTC2Q8IXT2 367 aaPredicted RBP8.43□□□□□ -1.06
TSPAN8-201ENST00000247829 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
TSPAN8-201ENST00000247829 PRRT3Q5FWE3 981 aa8.42□□□□□ -1.06
TSPAN8-201ENST00000247829 ILDR2Q71H61 639 aa8.42□□□□□ -1.06
TSPAN8-201ENST00000247829 C1orf127Q8N9H9 656 aa8.42□□□□□ -1.06
TSPAN8-201ENST00000247829 TMEM87AQ8NBN3 555 aa8.42□□□□□ -1.06
TSPAN8-201ENST00000247829 FOXD3Q9UJU5 478 aaPredicted RBP8.42□□□□□ -1.06
TSPAN8-201ENST00000247829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.42□□□□□ -1.06
TSPAN8-201ENST00000247829 TNFRSF21O75509 655 aa8.41□□□□□ -1.06
TSPAN8-201ENST00000247829 SPATA31C1P0DKV0 1188 aa8.41□□□□□ -1.06
TSPAN8-201ENST00000247829 ERCC5P28715 1186 aaPredicted RBP8.41□□□□□ -1.06
TSPAN8-201ENST00000247829 MSL1Q68DK7 614 aa8.41□□□□□ -1.06
TSPAN8-201ENST00000247829 RBSNQ9H1K0 784 aa8.41□□□□□ -1.06
TSPAN8-201ENST00000247829 SPG7Q9UQ90 795 aa8.41□□□□□ -1.06
TSPAN8-201ENST00000247829 A0A0A0MRY4 1105 aa8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 GDF6Q6KF10 455 aaPredicted RBP8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 CD163Q86VB7 1156 aa8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 NCAPG2Q86XI2 1143 aa8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 CRELD1Q96HD1 420 aa8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 SPACA7Q96KW9 195 aa8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 FRMD6Q96NE9 622 aa8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 METTL5Q9NRN9 209 aaKnown RBP8.4□□□□□ -1.06
TSPAN8-201ENST00000247829 KIF4AO95239 1232 aa8.39□□□□□ -1.07
TSPAN8-201ENST00000247829 CES1P23141 567 aa8.39□□□□□ -1.07
TSPAN8-201ENST00000247829 FANCCQ00597 558 aa8.39□□□□□ -1.07
TSPAN8-201ENST00000247829 GRIK4Q16099 956 aa8.39□□□□□ -1.07
TSPAN8-201ENST00000247829 USPL1Q5W0Q7 1092 aa8.39□□□□□ -1.07
TSPAN8-201ENST00000247829 WFDC8Q8IUA0 241 aa8.39□□□□□ -1.07
TSPAN8-201ENST00000247829 KANSL3Q9P2N6 904 aa8.39□□□□□ -1.07
TSPAN8-201ENST00000247829 MSTNO14793 375 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 PHACTR2O75167 634 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 IGHA1P01876 353 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 CHRNA4P43681 627 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 ATP11AP98196 1134 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 C9orf131Q5VYM1 1079 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 METTL16Q86W50 562 aaKnown RBP8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 CEP120Q8N960 986 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 SALL4Q9UJQ4 1053 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 TRIM33Q9UPN9 1127 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 AK5Q9Y6K8 562 aa8.38□□□□□ -1.07
TSPAN8-201ENST00000247829 EIF4BP23588 611 aaKnown RBP8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 ZNF76P36508 570 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 BAG6P46379 1132 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 RAC1P63000 192 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 RAD51AP2Q09MP3 1159 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 NAALADL2Q58DX5 795 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 CEP135Q66GS9 1140 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 IL22RA1Q8N6P7 574 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 SREK1Q8WXA9 508 aaKnown RBP8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 PMEPA1Q969W9 287 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 CCDC74AQ96AQ1 378 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 SPOCK3Q9BQ16 436 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 RASSF4Q9H2L5 321 aa8.37□□□□□ -1.07
TSPAN8-201ENST00000247829 PROCP04070 461 aa8.36□□□□□ -1.07
TSPAN8-201ENST00000247829 CTSHP09668 335 aa8.36□□□□□ -1.07
TSPAN8-201ENST00000247829 PI16Q6UXB8 463 aa8.36□□□□□ -1.07
TSPAN8-201ENST00000247829 NT5DC4Q86YG4 428 aa8.36□□□□□ -1.07
TSPAN8-201ENST00000247829 RNF34Q969K3 372 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms