RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 SMARCC1Q92922 1105 aaPredicted RBP17.94■□□□□ 0.46
DDX49-201ENST00000247003 TRIM44Q96DX7 344 aaPredicted RBP17.94■□□□□ 0.46
DDX49-201ENST00000247003 GDPD2Q9HCC8 539 aa17.94■□□□□ 0.46
DDX49-201ENST00000247003 CTNNA3Q9UI47 895 aa17.94■□□□□ 0.46
DDX49-201ENST00000247003 STK3Q13188 491 aa17.93■□□□□ 0.46
DDX49-201ENST00000247003 TTF1Q15361 905 aaPredicted RBP17.93■□□□□ 0.46
DDX49-201ENST00000247003 PARP10Q53GL7 1025 aa17.93■□□□□ 0.46
DDX49-201ENST00000247003 LRSAM1Q6UWE0 723 aa17.93■□□□□ 0.46
DDX49-201ENST00000247003 MARCH10Q8NA82 808 aaPredicted RBP17.93■□□□□ 0.46
DDX49-201ENST00000247003 CNPY2Q9Y2B0 182 aa17.93■□□□□ 0.46
DDX49-201ENST00000247003 LAMA4Q16363 1823 aa17.93■□□□□ 0.46
DDX49-201ENST00000247003 MROH5Q6ZUA9 1318 aa17.93■□□□□ 0.46
DDX49-201ENST00000247003 DHX32Q7L7V1 743 aaKnown RBP17.93■□□□□ 0.46
DDX49-201ENST00000247003 GTF3C6Q969F1 213 aa17.93■□□□□ 0.46
DDX49-201ENST00000247003 SYCE3A1L190 88 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 M0R2C6 588 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 FIBPO43427 364 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 ZAP70P43403 619 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 UBE2HP62256 183 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 CCDC173Q0VFZ6 552 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 INTS5Q6P9B9 1019 aaKnown RBP17.92■□□□□ 0.46
DDX49-201ENST00000247003 APPBP2Q92624 585 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 CHMP4CQ96CF2 233 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 ZNF512BQ96KM6 892 aaPredicted RBP17.92■□□□□ 0.46
DDX49-201ENST00000247003 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
DDX49-201ENST00000247003 NSFL1CQ9UNZ2 370 aaKnown RBP17.92■□□□□ 0.46
DDX49-201ENST00000247003 ARAP2Q8WZ64 1704 aa17.92■□□□□ 0.46
DDX49-201ENST00000247003 PDE8BO95263 885 aa17.91■□□□□ 0.46
DDX49-201ENST00000247003 ZNF652Q9Y2D9 606 aa17.91■□□□□ 0.46
DDX49-201ENST00000247003 LAMB2P55268 1798 aa17.91■□□□□ 0.46
DDX49-201ENST00000247003 TCHHQ07283 1943 aa17.91■□□□□ 0.46
DDX49-201ENST00000247003 UQCRFS1P1P0C7P4 283 aa17.91■□□□□ 0.46
DDX49-201ENST00000247003 COL9A3Q14050 684 aaPredicted RBP17.91■□□□□ 0.46
DDX49-201ENST00000247003 PUM3Q15397 648 aaKnown RBP17.91■□□□□ 0.46
DDX49-201ENST00000247003 IMMTQ16891 758 aaKnown RBP17.91■□□□□ 0.46
DDX49-201ENST00000247003 SLFNL1Q499Z3 407 aa17.91■□□□□ 0.46
DDX49-201ENST00000247003 BRF1Q92994 677 aa17.91■□□□□ 0.46
DDX49-201ENST00000247003 OSBP2Q969R2 916 aa17.91■□□□□ 0.46
DDX49-201ENST00000247003 E7EWF7 191 aa17.9■□□□□ 0.46
DDX49-201ENST00000247003 SCARF1Q14162 830 aa17.9■□□□□ 0.46
DDX49-201ENST00000247003 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
DDX49-201ENST00000247003 KIF3AQ9Y496 699 aa17.9■□□□□ 0.46
DDX49-201ENST00000247003 GADD45BO75293 160 aaPredicted RBP17.89■□□□□ 0.45
DDX49-201ENST00000247003 SLC5A1P13866 664 aa17.89■□□□□ 0.45
DDX49-201ENST00000247003 KRT85P78386 507 aa17.89■□□□□ 0.45
DDX49-201ENST00000247003 CCDC152Q4G0S7 254 aa17.89■□□□□ 0.45
DDX49-201ENST00000247003 STOX1Q6ZVD7 989 aa17.89■□□□□ 0.45
DDX49-201ENST00000247003 LPIN2Q92539 896 aa17.89■□□□□ 0.45
DDX49-201ENST00000247003 MPHOSPH8Q99549 860 aa17.89■□□□□ 0.45
DDX49-201ENST00000247003 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.45
DDX49-201ENST00000247003 CAMTA2O94983 1202 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 LETM1O95202 739 aaPredicted RBP17.88■□□□□ 0.45
DDX49-201ENST00000247003 MCAMP43121 646 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 DNM1Q05193 864 aaKnown RBP17.88■□□□□ 0.45
DDX49-201ENST00000247003 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 ZNF831Q5JPB2 1677 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 FAM177BA6PVY3 158 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 CCDC183Q5T5S1 534 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 CDC37L1Q7L3B6 337 aa17.88■□□□□ 0.45
DDX49-201ENST00000247003 LLPHQ9BRT6 129 aaKnown RBP17.88■□□□□ 0.45
DDX49-201ENST00000247003 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDX49-201ENST00000247003 DDX60Q8IY21 1712 aaKnown RBP17.88■□□□□ 0.45
DDX49-201ENST00000247003 ATRNO75882 1429 aa17.87■□□□□ 0.45
DDX49-201ENST00000247003 ITPK1Q13572 414 aa17.87■□□□□ 0.45
DDX49-201ENST00000247003 LRRC2Q9BYS8 371 aa17.87■□□□□ 0.45
DDX49-201ENST00000247003 TSPY26PQ9H489 355 aa17.87■□□□□ 0.45
DDX49-201ENST00000247003 AKAP11Q9UKA4 1901 aa17.87■□□□□ 0.45
DDX49-201ENST00000247003 H3BQV1 296 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 PFKFB2O60825 505 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
DDX49-201ENST00000247003 ARID4AP29374 1257 aaPredicted RBP17.86■□□□□ 0.45
DDX49-201ENST00000247003 HSPA1LP34931 641 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 IGHMBP2P38935 993 aaKnown RBP17.86■□□□□ 0.45
DDX49-201ENST00000247003 IFFO2Q5TF58 517 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 CCDC102BQ68D86 513 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 PI16Q6UXB8 463 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 GPAA1O43292 621 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 HMGN5P82970 282 aaKnown RBP17.86■□□□□ 0.45
DDX49-201ENST00000247003 RBSNQ9H1K0 784 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 NAP1L2Q9ULW6 460 aaPredicted RBP17.86■□□□□ 0.45
DDX49-201ENST00000247003 SPATA31A6Q5VVP1 1343 aa17.86■□□□□ 0.45
DDX49-201ENST00000247003 RTL9Q8NET4 1388 aa17.85■□□□□ 0.45
DDX49-201ENST00000247003 DTNBO60941 627 aa17.85■□□□□ 0.45
DDX49-201ENST00000247003 IDH1O75874 414 aaKnown RBP17.85■□□□□ 0.45
DDX49-201ENST00000247003 ADD2P35612 726 aa17.85■□□□□ 0.45
DDX49-201ENST00000247003 EXOSC10Q01780 885 aaKnown RBP17.85■□□□□ 0.45
DDX49-201ENST00000247003 SCRN1Q12765 414 aa17.85■□□□□ 0.45
DDX49-201ENST00000247003 SLC9C2Q5TAH2 1124 aa17.85■□□□□ 0.45
DDX49-201ENST00000247003 RALYLQ86SE5 291 aaKnown RBP17.85■□□□□ 0.45
DDX49-201ENST00000247003 AGXT2Q9BYV1 514 aa17.85■□□□□ 0.45
DDX49-201ENST00000247003 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
DDX49-201ENST00000247003 FAM98CQ17RN3 349 aaKnown RBP17.84■□□□□ 0.45
DDX49-201ENST00000247003 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
DDX49-201ENST00000247003 SCAND2PQ9GZW5 306 aaPredicted RBP17.84■□□□□ 0.45
DDX49-201ENST00000247003 PUS7LQ9H0K6 701 aaKnown RBP17.84■□□□□ 0.45
DDX49-201ENST00000247003 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
DDX49-201ENST00000247003 ZNF213O14771 459 aa17.84■□□□□ 0.45
DDX49-201ENST00000247003 NTSR2O95665 410 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms