RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 RABEP1Q15276 862 aa22.56■■□□□ 1.2
TNFSF9-201ENST00000245817 CRY2Q49AN0 593 aa22.56■■□□□ 1.2
TNFSF9-201ENST00000245817 CAVIN4Q5BKX8 364 aa22.56■■□□□ 1.2
TNFSF9-201ENST00000245817 HSCBQ8IWL3 235 aa22.56■■□□□ 1.2
TNFSF9-201ENST00000245817 A0A0D9SFI3 127 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 MMP10P09238 476 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 MCAMP43121 646 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 SCARF1Q14162 830 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 KIF2CQ99661 725 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 LSG1Q9H089 658 aaKnown RBP22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 GNL3LQ9NVN8 582 aaKnown RBP22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 SPEF2Q9C093 1822 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 SLC4A3P48751 1232 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 ANAPC15P60006 121 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 MCMDC2Q4G0Z9 681 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 VPS37DQ86XT2 251 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 BRIP1Q9BX63 1249 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 ANTXR1Q9H6X2 564 aa22.55■■□□□ 1.2
TNFSF9-201ENST00000245817 RNF113AO15541 343 aaKnown RBP22.54■■□□□ 1.2
TNFSF9-201ENST00000245817 ZFYP08048 801 aaPredicted RBP22.54■■□□□ 1.2
TNFSF9-201ENST00000245817 MSL1Q68DK7 614 aa22.54■■□□□ 1.2
TNFSF9-201ENST00000245817 ZSCAN25Q6NSZ9 544 aa22.54■■□□□ 1.2
TNFSF9-201ENST00000245817 HELLSQ9NRZ9 838 aa22.54■■□□□ 1.2
TNFSF9-201ENST00000245817 ZBTB7AO95365 584 aa22.53■■□□□ 1.2
TNFSF9-201ENST00000245817 BCAMP50895 628 aa22.53■■□□□ 1.2
TNFSF9-201ENST00000245817 MTFR1LQ9H019 292 aa22.53■■□□□ 1.2
TNFSF9-201ENST00000245817 HSPA4P34932 840 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 SPATA5Q8NB90 893 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 TBC1D2Q9BYX2 928 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 ANKIB1Q9P2G1 1089 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 CCDC171Q6TFL3 1326 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 TNRC6CQ9HCJ0 1690 aaKnown RBP22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 BBOX1O75936 387 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 PDE6BP35913 854 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 PI16Q6UXB8 463 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 CASZ1Q86V15 1759 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 SNX21Q969T3 373 aa22.52■■□□□ 1.2
TNFSF9-201ENST00000245817 COL4A1P02462 1669 aa22.51■■□□□ 1.19
TNFSF9-201ENST00000245817 KLRG2A4D1S0 409 aaPredicted RBP22.51■■□□□ 1.19
TNFSF9-201ENST00000245817 CRAMP1Q96RY5 1269 aa22.51■■□□□ 1.19
TNFSF9-201ENST00000245817 HMG20BQ9P0W2 317 aa22.51■■□□□ 1.19
TNFSF9-201ENST00000245817 HOXA10P31260 410 aaPredicted RBP22.5■■□□□ 1.19
TNFSF9-201ENST00000245817 ATF5Q9Y2D1 282 aaPredicted RBP22.5■■□□□ 1.19
TNFSF9-201ENST00000245817 MED23Q9ULK4 1368 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 ZNF804BA4D1E1 1349 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 ST18O60284 1047 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 CYP2E1P05181 493 aaPredicted RBP22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 PTH1RQ03431 593 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 RASGRF1Q13972 1273 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 WASHC4Q2M389 1173 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 ZMYM1Q5SVZ6 1142 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 LEMD3Q9Y2U8 911 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 ARAP2Q8WZ64 1704 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 IDH1O75874 414 aaKnown RBP22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 GYG1P46976 350 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 TMC4Q7Z404 712 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 ZNF589Q86UQ0 364 aaPredicted RBP22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 TAF1P21675 1872 aa22.49■■□□□ 1.19
TNFSF9-201ENST00000245817 XDHP47989 1333 aa22.48■■□□□ 1.19
TNFSF9-201ENST00000245817 FRAT2O75474 233 aaPredicted RBP22.48■■□□□ 1.19
TNFSF9-201ENST00000245817 RNF20Q5VTR2 975 aa22.48■■□□□ 1.19
TNFSF9-201ENST00000245817 MAP4K1Q92918 833 aa22.48■■□□□ 1.19
TNFSF9-201ENST00000245817 NPR1P16066 1061 aa22.47■■□□□ 1.19
TNFSF9-201ENST00000245817 ZKSCAN1P17029 563 aaPredicted RBP22.47■■□□□ 1.19
TNFSF9-201ENST00000245817 SEC62Q99442 399 aaKnown RBP22.47■■□□□ 1.19
TNFSF9-201ENST00000245817 RBM8AQ9Y5S9 174 aaKnown RBP22.47■■□□□ 1.19
TNFSF9-201ENST00000245817 POLD1P28340 1107 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 ALDH1B1P30837 517 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 MAP3K12Q12852 859 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 IL27Q8NEV9 243 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 FAM84BQ96KN1 310 aaPredicted RBP22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 PIH1D3Q9NQM4 214 aaKnown RBP22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 DENND2AQ9ULE3 1009 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 PALD1Q9ULE6 856 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 CHGBP05060 677 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 HIBADHP31937 336 aaKnown RBP22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 SLC9C2Q5TAH2 1124 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 PRPF40BQ6NWY9 871 aaKnown RBP22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 APPBP2Q92624 585 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 SPON1Q9HCB6 807 aa22.46■■□□□ 1.19
TNFSF9-201ENST00000245817 SEMA3EO15041 775 aa22.45■■□□□ 1.18
TNFSF9-201ENST00000245817 CCDC129Q6ZRS4 1044 aa22.45■■□□□ 1.18
TNFSF9-201ENST00000245817 FBXO33Q7Z6M2 555 aa22.45■■□□□ 1.18
TNFSF9-201ENST00000245817 NSFL1CQ9UNZ2 370 aaKnown RBP22.45■■□□□ 1.18
TNFSF9-201ENST00000245817 WTIPA6NIX2 430 aaPredicted RBP22.44■■□□□ 1.18
TNFSF9-201ENST00000245817 SRGNP10124 158 aa22.44■■□□□ 1.18
TNFSF9-201ENST00000245817 ATP2B4P23634 1241 aa22.44■■□□□ 1.18
TNFSF9-201ENST00000245817 NEK4P51957 841 aa22.44■■□□□ 1.18
TNFSF9-201ENST00000245817 IL17RAQ96F46 866 aa22.44■■□□□ 1.18
TNFSF9-201ENST00000245817 IQSEC3Q9UPP2 1182 aaPredicted RBP22.44■■□□□ 1.18
TNFSF9-201ENST00000245817 SNX14Q9Y5W7 946 aa22.44■■□□□ 1.18
TNFSF9-201ENST00000245817 U3KPZ7 1027 aaPredicted RBP22.44■■□□□ 1.18
TNFSF9-201ENST00000245817 PPEF1O14829 653 aaPredicted RBP22.43■■□□□ 1.18
TNFSF9-201ENST00000245817 ADD2P35612 726 aa22.43■■□□□ 1.18
TNFSF9-201ENST00000245817 NECTIN1Q15223 517 aa22.43■■□□□ 1.18
TNFSF9-201ENST00000245817 UBE3CQ15386 1083 aa22.43■■□□□ 1.18
TNFSF9-201ENST00000245817 MASTLQ96GX5 879 aa22.43■■□□□ 1.18
TNFSF9-201ENST00000245817 LRP2BPQ9P2M1 347 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms