RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 OSBP2Q969R2 916 aa25.92■■□□□ 1.74
RNF39-201ENST00000244360 GREM2Q9H772 168 aa25.92■■□□□ 1.74
RNF39-201ENST00000244360 NUP98P52948 1817 aa25.91■■□□□ 1.74
RNF39-201ENST00000244360 ITGA6P23229 1130 aa25.91■■□□□ 1.74
RNF39-201ENST00000244360 KRT85P78386 507 aa25.91■■□□□ 1.74
RNF39-201ENST00000244360 FKBP4Q02790 459 aaKnown RBP eCLIP25.91■■□□□ 1.74
RNF39-201ENST00000244360 BRF1Q92994 677 aa25.91■■□□□ 1.74
RNF39-201ENST00000244360 PFKFB2O60825 505 aa25.91■■□□□ 1.74
RNF39-201ENST00000244360 SCARF1Q14162 830 aa25.91■■□□□ 1.74
RNF39-201ENST00000244360 LLPHQ9BRT6 129 aaKnown RBP25.91■■□□□ 1.74
RNF39-201ENST00000244360 CDCA7Q9BWT1 371 aaPredicted RBP25.91■■□□□ 1.74
RNF39-201ENST00000244360 LRP5O75197 1615 aa25.91■■□□□ 1.74
RNF39-201ENST00000244360 ATP2B3Q16720 1220 aa25.9■■□□□ 1.74
RNF39-201ENST00000244360 GLIPR1L2Q4G1C9 344 aa25.9■■□□□ 1.74
RNF39-201ENST00000244360 SMARCC2Q8TAQ2 1214 aa25.9■■□□□ 1.74
RNF39-201ENST00000244360 ZNF512BQ96KM6 892 aaPredicted RBP25.9■■□□□ 1.74
RNF39-201ENST00000244360 E7EWF7 191 aa25.9■■□□□ 1.74
RNF39-201ENST00000244360 IRS4O14654 1257 aaPredicted RBP25.9■■□□□ 1.74
RNF39-201ENST00000244360 JAK2O60674 1132 aa25.9■■□□□ 1.74
RNF39-201ENST00000244360 ANKRD18BA2A2Z9 1011 aa25.89■■□□□ 1.74
RNF39-201ENST00000244360 PTMAP06454 111 aaKnown RBP25.89■■□□□ 1.74
RNF39-201ENST00000244360 METTL24Q5JXM2 366 aa25.89■■□□□ 1.74
RNF39-201ENST00000244360 VGLL2Q8N8G2 317 aa25.89■■□□□ 1.74
RNF39-201ENST00000244360 HSP90B1P14625 803 aaKnown RBP25.88■■□□□ 1.73
RNF39-201ENST00000244360 SCRN1Q12765 414 aa25.88■■□□□ 1.73
RNF39-201ENST00000244360 LDHAL6AQ6ZMR3 332 aa25.88■■□□□ 1.73
RNF39-201ENST00000244360 FERMT3Q86UX7 667 aa25.88■■□□□ 1.73
RNF39-201ENST00000244360 NRAPQ86VF7 1730 aa25.88■■□□□ 1.73
RNF39-201ENST00000244360 FOXP2O15409 715 aa25.88■■□□□ 1.73
RNF39-201ENST00000244360 TTC6Q86TZ1 520 aa25.88■■□□□ 1.73
RNF39-201ENST00000244360 DZIP3Q86Y13 1208 aaKnown RBP25.88■■□□□ 1.73
RNF39-201ENST00000244360 ZNF34Q8IZ26 560 aa25.88■■□□□ 1.73
RNF39-201ENST00000244360 TRMT112Q9UI30 125 aaKnown RBP25.88■■□□□ 1.73
RNF39-201ENST00000244360 PDE8AO60658 829 aa25.87■■□□□ 1.73
RNF39-201ENST00000244360 ZAP70P43403 619 aa25.87■■□□□ 1.73
RNF39-201ENST00000244360 FBXL16Q8N461 479 aa25.87■■□□□ 1.73
RNF39-201ENST00000244360 LRRC2Q9BYS8 371 aa25.87■■□□□ 1.73
RNF39-201ENST00000244360 A0A0G2JLW4 131 aa25.87■■□□□ 1.73
RNF39-201ENST00000244360 APPBP2Q92624 585 aa25.87■■□□□ 1.73
RNF39-201ENST00000244360 SYTL4Q96C24 671 aaPredicted RBP25.87■■□□□ 1.73
RNF39-201ENST00000244360 UBN2Q6ZU65 1347 aa25.87■■□□□ 1.73
RNF39-201ENST00000244360 CTNNA3Q9UI47 895 aa25.86■■□□□ 1.73
RNF39-201ENST00000244360 NWD2Q9ULI1 1742 aa25.86■■□□□ 1.73
RNF39-201ENST00000244360 SCAND2PQ9GZW5 306 aaPredicted RBP25.86■■□□□ 1.73
RNF39-201ENST00000244360 THRAP3Q9Y2W1 955 aaKnown RBP25.86■■□□□ 1.73
RNF39-201ENST00000244360 AKAP11Q9UKA4 1901 aa25.85■■□□□ 1.73
RNF39-201ENST00000244360 SLIT2O94813 1529 aa25.85■■□□□ 1.73
RNF39-201ENST00000244360 MYH7P12883 1935 aa25.85■■□□□ 1.73
RNF39-201ENST00000244360 SPATA31A1Q5TZJ5 1347 aa25.85■■□□□ 1.73
RNF39-201ENST00000244360 FGD1P98174 961 aa25.85■■□□□ 1.73
RNF39-201ENST00000244360 AK7Q96M32 723 aa25.85■■□□□ 1.73
RNF39-201ENST00000244360 RREB1Q92766 1687 aa25.85■■□□□ 1.73
RNF39-201ENST00000244360 CICQ96RK0 1608 aaPredicted RBP25.85■■□□□ 1.73
RNF39-201ENST00000244360 EIF5P55010 431 aaKnown RBP25.84■■□□□ 1.73
RNF39-201ENST00000244360 RESTQ13127 1097 aa25.84■■□□□ 1.73
RNF39-201ENST00000244360 NSUN7Q8NE18 718 aaKnown RBP25.84■■□□□ 1.73
RNF39-201ENST00000244360 FUCA2Q9BTY2 467 aa25.84■■□□□ 1.73
RNF39-201ENST00000244360 FAM173BQ6P4H8 233 aa25.84■■□□□ 1.73
RNF39-201ENST00000244360 CNNM1Q9NRU3 951 aa25.84■■□□□ 1.73
RNF39-201ENST00000244360 TBC1D2BQ9UPU7 963 aa25.84■■□□□ 1.73
RNF39-201ENST00000244360 MCAMP43121 646 aa25.83■■□□□ 1.73
RNF39-201ENST00000244360 KIAA2012Q0VF49 1180 aa25.83■■□□□ 1.73
RNF39-201ENST00000244360 WASHC4Q2M389 1173 aa25.83■■□□□ 1.73
RNF39-201ENST00000244360 TTLL5Q6EMB2 1281 aa25.83■■□□□ 1.73
RNF39-201ENST00000244360 R3HCC1Q9Y3T6 440 aaKnown RBP25.83■■□□□ 1.73
RNF39-201ENST00000244360 ATRNO75882 1429 aa25.83■■□□□ 1.73
RNF39-201ENST00000244360 EVCP57679 992 aa25.83■■□□□ 1.72
RNF39-201ENST00000244360 APOBRQ0VD83 1088 aa25.83■■□□□ 1.72
RNF39-201ENST00000244360 ZNF274Q96GC6 653 aaPredicted RBP25.83■■□□□ 1.72
RNF39-201ENST00000244360 PDE8BO95263 885 aa25.82■■□□□ 1.72
RNF39-201ENST00000244360 CTDNEP1O95476 244 aa25.82■■□□□ 1.72
RNF39-201ENST00000244360 PI16Q6UXB8 463 aa25.82■■□□□ 1.72
RNF39-201ENST00000244360 HMGN5P82970 282 aaKnown RBP25.82■■□□□ 1.72
RNF39-201ENST00000244360 INTS5Q6P9B9 1019 aaKnown RBP25.82■■□□□ 1.72
RNF39-201ENST00000244360 SALL1Q9NSC2 1324 aa25.81■■□□□ 1.72
RNF39-201ENST00000244360 ARAP2Q8WZ64 1704 aa25.81■■□□□ 1.72
RNF39-201ENST00000244360 NAA16Q6N069 864 aaPredicted RBP25.81■■□□□ 1.72
RNF39-201ENST00000244360 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.81■■□□□ 1.72
RNF39-201ENST00000244360 PUS7LQ9H0K6 701 aaKnown RBP25.81■■□□□ 1.72
RNF39-201ENST00000244360 ZSCAN16Q9H4T2 348 aaPredicted RBP25.81■■□□□ 1.72
RNF39-201ENST00000244360 KAT6BQ8WYB5 2073 aa25.81■■□□□ 1.72
RNF39-201ENST00000244360 IMMTQ16891 758 aaKnown RBP25.8■■□□□ 1.72
RNF39-201ENST00000244360 LEO1Q8WVC0 666 aaPredicted RBP25.8■■□□□ 1.72
RNF39-201ENST00000244360 ZSCAN25Q6NSZ9 544 aa25.8■■□□□ 1.72
RNF39-201ENST00000244360 CHMP4CQ96CF2 233 aa25.8■■□□□ 1.72
RNF39-201ENST00000244360 CCDC87Q9NVE4 849 aa25.8■■□□□ 1.72
RNF39-201ENST00000244360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.8■■□□□ 1.72
RNF39-201ENST00000244360 FGAP02671 866 aa25.79■■□□□ 1.72
RNF39-201ENST00000244360 ARID4AP29374 1257 aaPredicted RBP25.79■■□□□ 1.72
RNF39-201ENST00000244360 PDIA3P30101 505 aaKnown RBP25.79■■□□□ 1.72
RNF39-201ENST00000244360 TTF1Q15361 905 aaPredicted RBP25.79■■□□□ 1.72
RNF39-201ENST00000244360 DDB1Q16531 1140 aa25.79■■□□□ 1.72
RNF39-201ENST00000244360 DDX11Q96FC9 970 aa25.79■■□□□ 1.72
RNF39-201ENST00000244360 PDCL3Q9H2J4 239 aa25.79■■□□□ 1.72
RNF39-201ENST00000244360 PTPDC1A2A3K4 754 aa25.79■■□□□ 1.72
RNF39-201ENST00000244360 ADD2P35612 726 aa25.79■■□□□ 1.72
RNF39-201ENST00000244360 SPATA32Q96LK8 384 aa25.79■■□□□ 1.72
RNF39-201ENST00000244360 DDX60Q8IY21 1712 aaKnown RBP25.78■■□□□ 1.72
RNF39-201ENST00000244360 GPAA1O43292 621 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 FGFR2P21802 821 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms