RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MARCKSP29966 332 aaPredicted RBP15.04■□□□□ -0
COL1A1-201ENST00000225964 CYLC1P35663 651 aaPredicted RBP15.04■□□□□ -0
COL1A1-201ENST00000225964 TPTE2Q6XPS3 522 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 CABLES1Q8TDN4 633 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 CCDC117Q8IWD4 279 aaPredicted RBP15.04■□□□□ -0
COL1A1-201ENST00000225964 DHX58Q96C10 678 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 PKD2L1Q9P0L9 805 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 SAP30BPQ9UHR5 308 aaKnown RBP15.04■□□□□ -0
COL1A1-201ENST00000225964 CUL7Q14999 1698 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 FANCAO15360 1455 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 PROCA1Q8NCQ7 364 aaPredicted RBP15.03■□□□□ -0
COL1A1-201ENST00000225964 PPIP5K1Q6PFW1 1433 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 GNG11P61952 73 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 UBE2HP62256 183 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 EYA3Q99504 573 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 BACH1O14867 736 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 CEP135Q66GS9 1140 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 PRDM10Q9NQV6 1147 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
COL1A1-201ENST00000225964 PAG1Q9NWQ8 432 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 ATP2C2O75185 946 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 ZNF165P49910 485 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 GRM8O00222 908 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 SH3BP5O60239 455 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 KIF4AO95239 1232 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 MCM7P33993 719 aa15.03■□□□□ -0
COL1A1-201ENST00000225964 RBM8AQ9Y5S9 174 aaKnown RBP15.03■□□□□ -0
COL1A1-201ENST00000225964 LDHBP07195 334 aaKnown RBP15.02■□□□□ -0
COL1A1-201ENST00000225964 IL2RBP14784 551 aa15.02■□□□□ -0
COL1A1-201ENST00000225964 PLCG2P16885 1265 aa15.02■□□□□ -0
COL1A1-201ENST00000225964 AKAP4Q5JQC9 854 aa15.02■□□□□ -0
COL1A1-201ENST00000225964 ODF2LQ9ULJ1 636 aa15.02■□□□□ -0
COL1A1-201ENST00000225964 GIMAP6Q6P9H5 292 aa15.02□□□□□ -0.01
COL1A1-201ENST00000225964 HELBQ8NG08 1087 aaPredicted RBP15.02□□□□□ -0.01
COL1A1-201ENST00000225964 RAB3GAP1Q15042 981 aa15.02□□□□□ -0.01
COL1A1-201ENST00000225964 ANKRD36BQ8N2N9 1353 aa15.02□□□□□ -0.01
COL1A1-201ENST00000225964 PRPHP41219 470 aa15.02□□□□□ -0.01
COL1A1-201ENST00000225964 PSMC4P43686 418 aa15.02□□□□□ -0.01
COL1A1-201ENST00000225964 TCEANC2Q96MN5 208 aa15.02□□□□□ -0.01
COL1A1-201ENST00000225964 CEP83Q9Y592 693 aa15.02□□□□□ -0.01
COL1A1-201ENST00000225964 IRS4O14654 1257 aaPredicted RBP15.01□□□□□ -0.01
COL1A1-201ENST00000225964 IL15P40933 162 aaPredicted RBP15.01□□□□□ -0.01
COL1A1-201ENST00000225964 TBC1D2Q9BYX2 928 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 PSMA7O14818 248 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 KCNG4Q8TDN1 519 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 DHX29Q7Z478 1369 aaKnown RBP15.01□□□□□ -0.01
COL1A1-201ENST00000225964 ZSCAN22P10073 491 aaPredicted RBP15.01□□□□□ -0.01
COL1A1-201ENST00000225964 KRT79Q5XKE5 535 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 PICK1Q9NRD5 415 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 GNAT2P19087 354 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 PLCB3Q01970 1234 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 LRRC59Q96AG4 307 aaKnown RBP15.01□□□□□ -0.01
COL1A1-201ENST00000225964 TMOD4Q9NZQ9 345 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 CHST3Q7LGC8 479 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 MSANTD4Q8NCY6 345 aa15.01□□□□□ -0.01
COL1A1-201ENST00000225964 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.01□□□□□ -0.01
COL1A1-201ENST00000225964 MAK16Q9BXY0 300 aaKnown RBP15□□□□□ -0.01
COL1A1-201ENST00000225964 PLIN2Q99541 437 aa15□□□□□ -0.01
COL1A1-201ENST00000225964 ANKRD2Q9GZV1 360 aa15□□□□□ -0.01
COL1A1-201ENST00000225964 NOD1Q9Y239 953 aa15□□□□□ -0.01
COL1A1-201ENST00000225964 CNPY2Q9Y2B0 182 aa15□□□□□ -0.01
COL1A1-201ENST00000225964 KAT6BQ8WYB5 2073 aa15□□□□□ -0.01
COL1A1-201ENST00000225964 HARSP12081 509 aaKnown RBP15□□□□□ -0.01
COL1A1-201ENST00000225964 NMIQ13287 307 aaPredicted RBP15□□□□□ -0.01
COL1A1-201ENST00000225964 ANO6Q4KMQ2 910 aa15□□□□□ -0.01
COL1A1-201ENST00000225964 SPATA24Q86W54 205 aa15□□□□□ -0.01
COL1A1-201ENST00000225964 PA2G4Q9UQ80 394 aaKnown RBP15□□□□□ -0.01
COL1A1-201ENST00000225964 SNX16P57768 344 aa14.99□□□□□ -0.01
COL1A1-201ENST00000225964 MEIS3Q99687 375 aa14.99□□□□□ -0.01
COL1A1-201ENST00000225964 GNPATO15228 680 aa14.99□□□□□ -0.01
COL1A1-201ENST00000225964 FBF1Q8TES7 1133 aa14.99□□□□□ -0.01
COL1A1-201ENST00000225964 BMS1Q14692 1282 aaKnown RBP14.99□□□□□ -0.01
COL1A1-201ENST00000225964 KRT5P13647 590 aa14.99□□□□□ -0.01
COL1A1-201ENST00000225964 TRAPPC3LQ5T215 181 aa14.99□□□□□ -0.01
COL1A1-201ENST00000225964 KSR2Q6VAB6 950 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 NFATC2IPQ8NCF5 419 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 NSRP1Q9H0G5 558 aaKnown RBP14.98□□□□□ -0.01
COL1A1-201ENST00000225964 PARP1P09874 1014 aaKnown RBP14.98□□□□□ -0.01
COL1A1-201ENST00000225964 SLU7O95391 586 aaKnown RBP14.98□□□□□ -0.01
COL1A1-201ENST00000225964 CALML3P27482 149 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 NEK11Q8NG66 645 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 SDSP20132 328 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 GTF2F1P35269 517 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL1A1-201ENST00000225964 MAP7D1Q3KQU3 841 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 LMBR1Q8WVP7 490 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 ZFP91Q96JP5 570 aaPredicted RBP14.98□□□□□ -0.01
COL1A1-201ENST00000225964 SELENOSQ9BQE4 189 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 RFX1P22670 979 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 BMP2KLQ5H9B9 411 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 DCAF17Q5H9S7 520 aaPredicted RBP14.98□□□□□ -0.01
COL1A1-201ENST00000225964 AOPEPQ8N6M6 819 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 TMX3Q96JJ7 454 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 C14orf93Q9H972 538 aaKnown RBP14.98□□□□□ -0.01
COL1A1-201ENST00000225964 TXNDC16Q9P2K2 825 aa14.98□□□□□ -0.01
COL1A1-201ENST00000225964 ATP2A1O14983 1001 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 ZWINTO95229 277 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 MRPS27Q92552 414 aaKnown RBP14.97□□□□□ -0.01
COL1A1-201ENST00000225964 C11orf95C9JLR9 678 aaPredicted RBP14.97□□□□□ -0.01
COL1A1-201ENST00000225964 GAS8O95995 478 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms