RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 CAPN2P17655 700 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 CRKLP46109 303 aaKnown RBP12.01□□□□□ -0.49
CHERP-201ENST00000198939 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 GNAI2P04899 355 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 TMCO3Q6UWJ1 677 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 CAMKK2Q96RR4 588 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 KIF2AO00139 706 aaPredicted RBP12□□□□□ -0.49
CHERP-201ENST00000198939 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
CHERP-201ENST00000198939 EN1Q05925 392 aaPredicted RBP12□□□□□ -0.49
CHERP-201ENST00000198939 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
CHERP-201ENST00000198939 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.495e-7■■■□□ 15.5
CHERP-201ENST00000198939 SPATA32Q96LK8 384 aa12□□□□□ -0.49
CHERP-201ENST00000198939 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
CHERP-201ENST00000198939 RGL2O15211 777 aa12□□□□□ -0.49
CHERP-201ENST00000198939 HSPA4P34932 840 aa12□□□□□ -0.49
CHERP-201ENST00000198939 NECTIN2Q92692 538 aa12□□□□□ -0.49
CHERP-201ENST00000198939 DDX19AQ9NUU7 478 aaKnown RBP12□□□□□ -0.49
CHERP-201ENST00000198939 CHPF2Q9P2E5 772 aa12□□□□□ -0.49
CHERP-201ENST00000198939 LIG1P18858 919 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 CYP2C19P33261 490 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 ITPK1Q13572 414 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 TXLNBQ8N3L3 684 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 RASSF4Q9H2L5 321 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 RAD50Q92878 1312 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 ERCC6LQ2NKX8 1250 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 TRAPPC3LQ5T215 181 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 LRRC8AQ8IWT6 810 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 TFIP11Q9UBB9 837 aaKnown RBP11.99□□□□□ -0.49
CHERP-201ENST00000198939 ZNF652Q9Y2D9 606 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 UBR2Q8IWV8 1755 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 MYL6BP14649 208 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 RAD51AP2Q09MP3 1159 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 UBXN4Q92575 508 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 RSPH14Q9UHP6 348 aa11.99□□□□□ -0.49
CHERP-201ENST00000198939 TULP2O00295 520 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 A1BGP04217 495 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 GTF2A1P52655 376 aaPredicted RBP11.98□□□□□ -0.49
CHERP-201ENST00000198939 NEK11Q8NG66 645 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 FEZ2Q9UHY8 353 aaPredicted RBP11.98□□□□□ -0.49
CHERP-201ENST00000198939 MTMR6Q9Y217 621 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
CHERP-201ENST00000198939 CCDC69A6NI79 296 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 GNPATO15228 680 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 NEXNQ0ZGT2 675 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 LINC00116Q8NCU8 138 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 ZBTB9Q96C00 473 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 IL1RAPL2Q9NP60 686 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 PDRG1Q9NUG6 133 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 HDAC5Q9UQL6 1122 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 USP27XA6NNY8 438 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 PATL2C9JE40 543 aaKnown RBP11.98□□□□□ -0.49
CHERP-201ENST00000198939 F6X3S4 739 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 ZPR1O75312 459 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 CPA1P15085 419 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 SNW1Q13573 536 aaKnown RBP11.98□□□□□ -0.49
CHERP-201ENST00000198939 EZH2Q15910 746 aaKnown RBP11.98□□□□□ -0.49
CHERP-201ENST00000198939 SLFNL1Q499Z3 407 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 FAM173BQ6P4H8 233 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 C10orf67Q8IYJ2 551 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 ZSCAN31Q96LW9 406 aaPredicted RBP11.98□□□□□ -0.49
CHERP-201ENST00000198939 SCAND2PQ9GZW5 306 aaPredicted RBP11.98□□□□□ -0.49
CHERP-201ENST00000198939 DEF6Q9H4E7 631 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 TFCP2L1Q9NZI6 479 aa11.98□□□□□ -0.49
CHERP-201ENST00000198939 RGPD3A6NKT7 1758 aaPredicted RBP11.97□□□□□ -0.49
CHERP-201ENST00000198939 RGPD4Q7Z3J3 1758 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 FLIIQ13045 1269 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 CCDC144BQ3MJ40 725 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 ARHGAP29Q52LW3 1261 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 KRBA2Q6ZNG9 492 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 RIC3Q7Z5B4 369 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 TTC6Q86TZ1 520 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 PLA2G4DQ86XP0 818 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 CCDC144CPQ8IYA2 1237 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 SNX14Q9Y5W7 946 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 PDCP20941 246 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 JAKMIP1Q96N16 626 aaKnown RBP11.97□□□□□ -0.49
CHERP-201ENST00000198939 RFC4P35249 363 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 CCT4P50991 539 aaKnown RBP11.97□□□□□ -0.49
CHERP-201ENST00000198939 TDRD7Q8NHU6 1098 aaKnown RBP11.97□□□□□ -0.49
CHERP-201ENST00000198939 CYP46A1Q9Y6A2 500 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 ATP10DQ9P241 1426 aa11.97□□□□□ -0.49
CHERP-201ENST00000198939 PRAMEF22A3QJZ6 481 aa11.96□□□□□ -0.49
CHERP-201ENST00000198939 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
CHERP-201ENST00000198939 INTS5Q6P9B9 1019 aaKnown RBP11.96□□□□□ -0.49
CHERP-201ENST00000198939 CWC27Q6UX04 472 aaKnown RBP11.96□□□□□ -0.49
CHERP-201ENST00000198939 ARID5BQ14865 1188 aa11.96□□□□□ -0.49
CHERP-201ENST00000198939 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.49
CHERP-201ENST00000198939 NUTM1Q86Y26 1132 aa11.96□□□□□ -0.49
CHERP-201ENST00000198939 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
CHERP-201ENST00000198939 SH2B1Q9NRF2 756 aaPredicted RBP11.96□□□□□ -0.49
CHERP-201ENST00000198939 ZBTB1Q9Y2K1 713 aa11.96□□□□□ -0.49
CHERP-201ENST00000198939 LRRFIP2Q9Y608 721 aaKnown RBP11.96□□□□□ -0.49
CHERP-201ENST00000198939 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.49
CHERP-201ENST00000198939 EIF5P55010 431 aaKnown RBP11.96□□□□□ -0.5
CHERP-201ENST00000198939 KSR2Q6VAB6 950 aa11.96□□□□□ -0.5
CHERP-201ENST00000198939 LEKR1Q6ZMV7 388 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms