RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 GOLIM4O00461 696 aa23.33■■□□□ 1.33
PPP1R3F-201ENST00000055335 U3KPZ7 1027 aaPredicted RBP23.33■■□□□ 1.33
PPP1R3F-201ENST00000055335 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.33
PPP1R3F-201ENST00000055335 LINS1Q8NG48 757 aa23.33■■□□□ 1.33
PPP1R3F-201ENST00000055335 KIAA1468Q9P260 1216 aa23.33■■□□□ 1.33
PPP1R3F-201ENST00000055335 ENGASEQ8NFI3 743 aa23.33■■□□□ 1.32
PPP1R3F-201ENST00000055335 NRKQ7Z2Y5 1582 aa23.32■■□□□ 1.32
PPP1R3F-201ENST00000055335 COL15A1P39059 1388 aa23.32■■□□□ 1.32
PPP1R3F-201ENST00000055335 PLA2G4AP47712 749 aa23.32■■□□□ 1.32
PPP1R3F-201ENST00000055335 NEXNQ0ZGT2 675 aa23.32■■□□□ 1.32
PPP1R3F-201ENST00000055335 MCMDC2Q4G0Z9 681 aa23.32■■□□□ 1.32
PPP1R3F-201ENST00000055335 GIGYF1O75420 1035 aaPredicted RBP23.32■■□□□ 1.32
PPP1R3F-201ENST00000055335 DDX58O95786 925 aaKnown RBP23.32■■□□□ 1.32
PPP1R3F-201ENST00000055335 DHX32Q7L7V1 743 aaKnown RBP23.32■■□□□ 1.32
PPP1R3F-201ENST00000055335 CCDC150Q8NCX0 1101 aa23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 MED23Q9ULK4 1368 aa23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 ATP5J2-PTCD1G3V325 749 aa23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 PTCD1O75127 700 aaKnown RBP23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 H2AFXP16104 143 aaPredicted RBP23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 SYNE3Q6ZMZ3 975 aa23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
PPP1R3F-201ENST00000055335 PXDNLA1KZ92 1463 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 ETF1P62495 437 aaKnown RBP23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 ST5P78524 1137 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 TTLL5Q6EMB2 1281 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 MON2Q7Z3U7 1717 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 PFKFB2O60825 505 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 FANCCQ00597 558 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 TNNT3P45378 269 aaPredicted RBP23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 UBASH3AP57075 661 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 EVCP57679 992 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 FMR1NBQ8N0W7 255 aaPredicted RBP23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 SIRT1Q96EB6 747 aa23.3■■□□□ 1.32
PPP1R3F-201ENST00000055335 NAA16Q6N069 864 aaPredicted RBP23.29■■□□□ 1.32
PPP1R3F-201ENST00000055335 UBE3BQ7Z3V4 1068 aa23.29■■□□□ 1.32
PPP1R3F-201ENST00000055335 BABAM1Q9NWV8 329 aa23.29■■□□□ 1.32
PPP1R3F-201ENST00000055335 CEBPAP49715 358 aaPredicted RBP23.29■■□□□ 1.32
PPP1R3F-201ENST00000055335 OSBPL5Q9H0X9 879 aaPredicted RBP23.29■■□□□ 1.32
PPP1R3F-201ENST00000055335 CAPN2P17655 700 aa23.29■■□□□ 1.32
PPP1R3F-201ENST00000055335 CYP2C19P33261 490 aa23.29■■□□□ 1.32
PPP1R3F-201ENST00000055335 ZNF202O95125 648 aa23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 TNNI3KQ59H18 835 aa23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 DPF2Q92785 391 aa23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 C8orf76Q96K31 380 aa23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 FPGT-TNNI3KV9GXZ4 949 aa23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 GNG11P61952 73 aa23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 KRBA2Q6ZNG9 492 aa23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 ILDR1Q86SU0 546 aaPredicted RBP23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 L2HGDHQ9H9P8 463 aa23.28■■□□□ 1.32
PPP1R3F-201ENST00000055335 CPLX1O14810 134 aa23.27■■□□□ 1.32
PPP1R3F-201ENST00000055335 PDE4CQ08493 712 aa23.27■■□□□ 1.32
PPP1R3F-201ENST00000055335 SMARCC2Q8TAQ2 1214 aa23.27■■□□□ 1.32
PPP1R3F-201ENST00000055335 ORC3Q9UBD5 711 aaPredicted RBP23.27■■□□□ 1.32
PPP1R3F-201ENST00000055335 IGKV5-2P06315 115 aa23.27■■□□□ 1.32
PPP1R3F-201ENST00000055335 IMPACTQ9P2X3 320 aa23.27■■□□□ 1.32
PPP1R3F-201ENST00000055335 SPTLC2O15270 562 aa23.27■■□□□ 1.32
PPP1R3F-201ENST00000055335 HSP90AB3PQ58FF7 597 aa23.27■■□□□ 1.32
PPP1R3F-201ENST00000055335 COPS6Q7L5N1 327 aa23.26■■□□□ 1.31
PPP1R3F-201ENST00000055335 OAS2P29728 719 aaKnown RBP23.26■■□□□ 1.31
PPP1R3F-201ENST00000055335 TIMM10P62072 90 aa23.26■■□□□ 1.31
PPP1R3F-201ENST00000055335 ADALQ6DHV7 355 aa23.26■■□□□ 1.31
PPP1R3F-201ENST00000055335 XAGE3Q8WTP9 111 aa23.26■■□□□ 1.31
PPP1R3F-201ENST00000055335 PDIA3P30101 505 aaKnown RBP23.26■■□□□ 1.31
PPP1R3F-201ENST00000055335 TSGA10IPQ3SY00 556 aa23.25■■□□□ 1.31
PPP1R3F-201ENST00000055335 PLEKHO1Q53GL0 409 aaPredicted RBP23.25■■□□□ 1.31
PPP1R3F-201ENST00000055335 SMARCE1Q969G3 411 aa23.25■■□□□ 1.31
PPP1R3F-201ENST00000055335 ALDH8A1Q9H2A2 487 aaPredicted RBP23.25■■□□□ 1.31
PPP1R3F-201ENST00000055335 TMEM232C9JQI7 657 aa23.25■■□□□ 1.31
PPP1R3F-201ENST00000055335 TOP1P11387 765 aaKnown RBP23.25■■□□□ 1.31
PPP1R3F-201ENST00000055335 FAM208AQ9UK61 1670 aaKnown RBP23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 ZNF609O15014 1411 aa23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 PSDA5PKW4 1024 aaPredicted RBP23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 E7EWF7 191 aa23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 USPL1Q5W0Q7 1092 aa23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 LINC00301Q8NCQ3 95 aa23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 LLPHQ9BRT6 129 aaKnown RBP23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 KARSQ15046 597 aaKnown RBP23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 SNRKQ9NRH2 765 aa23.24■■□□□ 1.31
PPP1R3F-201ENST00000055335 HOXB7P09629 217 aa23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 ATP5JP18859 108 aa23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 LMAN1P49257 510 aa23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 RAD51AP2Q09MP3 1159 aa23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 FAM53CQ9NYF3 392 aa23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 RNMTO43148 476 aaKnown RBP23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 RXRAP19793 462 aa23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 CCDC93Q567U6 631 aa23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 C10orf67Q8IYJ2 551 aa23.23■■□□□ 1.31
PPP1R3F-201ENST00000055335 FKBP4Q02790 459 aaKnown RBP eCLIP23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 WASHC4Q2M389 1173 aa23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 PFKFB1P16118 471 aa23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 PNOCQ13519 176 aa23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 SKIDA1Q1XH10 827 aa23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 CERS3Q8IU89 383 aa23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 DESI2Q9BSY9 194 aa23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 CARMIL3Q8ND23 1372 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms