RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Aldh1l1Q8R0Y6 902 aa17.3■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Hdac9Q99N13 588 aa17.3■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Arrdc4A0A0B4J1F4 415 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Gm42688A0A0R3P9D1 673 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Prpmp5E9PXN1 296 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Evi5P97366 809 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Irf6P97431 467 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 OsbpQ3B7Z2 805 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Plbd2Q3TCN2 594 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Znf697Q569E7 569 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Tll1Q62381 1013 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Ccdc142Q8CAI1 738 aa17.29■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Myh15E9Q264 1925 aa17.28■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Prl3d3A0A0M6L0J6 224 aa17.28■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Brpf1B2RRD7 1212 aa17.28■□□□□ 0.36
Ldb3-207ENSMUST00000227819 LtbrP50284 415 aa17.28■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Bms1Q6PGF5 1284 aaKnown RBP17.28■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Cog5Q8C0L8 829 aa17.28■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Q8C5K5 320 aa17.28■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Tmem79Q9D709 391 aa17.28■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Pde8bE9Q4S1 865 aa17.27■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Ttll12Q3UDE2 639 aa17.27■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Polr3dQ91WD1 398 aa17.27■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Zcchc17Q9ESX4 241 aaKnown RBP17.27■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Tceal9Q9DD24 104 aa17.26■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Ddx20Q9JJY4 825 aaKnown RBP17.26■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Irs4Q9Z0Y7 1216 aa17.26■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Myh4Q5SX39 1939 aa17.26■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Ankrd44B2RXR6 993 aa17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Eya2O08575 532 aa17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Sult6b1P0CC03 303 aa17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Fam83bQ0VBM2 1012 aa17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Akap4Q60662 849 aa17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Ufl1Q8CCJ3 793 aaKnown RBP17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Rrs1Q9CYH6 365 aaKnown RBP17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Trmt44Q9D2Q2 713 aa17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Tgm5Q9D7I9 724 aa17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Ripk3Q9QZL0 486 aa17.25■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Mmp14P53690 582 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Mast3Q3U214 1321 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Pa2g4P50580 394 aaKnown RBP17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Slc10a4Q3UEZ8 437 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Gm5592Q3V0A6 857 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Atg9aQ68FE2 551 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Phf23Q8BSN5 401 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Epc2Q8C0I4 808 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Apbb1Q9QXJ1 710 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Letm1Q9Z2I0 738 aa17.24■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Scn10aQ6QIY3 1958 aa17.23■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Speer4dL7N216 212 aa17.23■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Hspa8P63017 646 aaKnown RBP17.23■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Atp8a2P98200 1148 aa17.23■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Slc10a5Q5PT54 434 aa17.23■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Sept9Q80UG5 583 aa17.23■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Pxylp1Q8BHA9 480 aa17.23■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Sik3Q6P4S6 1311 aa17.23■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Spata18Q0P557 537 aa17.22■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Slain1Q68FF7 579 aa17.22■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Ripk4Q9ERK0 786 aa17.22■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Ankrd63A2ARS0 390 aa17.21■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Slc4a10Q5DTL9 1118 aa17.21■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Mkrn1Q9QXP6 481 aa17.21■□□□□ 0.35
Ldb3-207ENSMUST00000227819 Arfgef1G3X9K3 1846 aaKnown RBP17.21■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Tanc1Q0VGY8 1856 aa17.2■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Prkg1P0C605 671 aa17.2■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Fgd1P52734 960 aa17.2■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Traf5P70191 558 aa17.2■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Tmem87bQ8BKU8 555 aa17.2■□□□□ 0.34
Ldb3-207ENSMUST00000227819 B3galt4Q9Z0F0 371 aa17.2■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Prr14lE9Q7C4 1971 aa17.2■□□□□ 0.34
Ldb3-207ENSMUST00000227819 MycnP03966 462 aaKnown RBP17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Fgl2P12804 432 aa17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Myo1bP46735 1107 aa17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Atp2b3Q0VF55 1220 aa17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Maco1Q7TQE6 664 aaKnown RBP17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Ciao1Q99KN2 339 aa17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Aldh1b1Q9CZS1 519 aa17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 EhhadhQ9DBM2 718 aa17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Chd5A2A8L1 1946 aa17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Myh13B1AR69 1938 aa17.19■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Stk36Q69ZM6 1316 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Arid4aF8VPQ2 1261 aaKnown RBP17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Usp17ldG5E8G2 545 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Usp17lcG5E8I7 545 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Ets1P27577 440 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Spg7Q3ULF4 781 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Rbm27Q5SFM8 1060 aaKnown RBP17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Sirt2Q8VDQ8 389 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Gm4340L7N2C4 268 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Mapkapk5O54992 473 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Prkar2bP31324 416 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Npr3P70180 536 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Mansc4Q3UU94 337 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Map3k12Q60700 888 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Slc4a7Q8BTY2 1034 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Dis3l2Q8CI75 870 aaKnown RBP17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Zbtb3Q91X45 518 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Rnf181Q9CY62 165 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Stag1Q9D3E6 1258 aa17.18■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Fbxo3Q9DC63 480 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms