RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Ttll12Q3UDE2 639 aa25.26■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Nup98Q6PFD9 1816 aaKnown RBP25.26■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Slc10a4Q3UEZ8 437 aa25.25■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Adora1Q60612 326 aa25.25■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Plcd4Q8K3R3 807 aa25.25■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Slc44a4Q91VA1 707 aa25.25■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Ncoa5Q91W39 579 aaKnown RBP25.25■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Tgm5Q9D7I9 724 aa25.25■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Col26a1Q91VF6 440 aa25.24■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Epc2Q8C0I4 808 aa25.23■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Chmp3Q9CQ10 224 aa25.23■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Tmem79Q9D709 391 aa25.23■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 EhhadhQ9DBM2 718 aa25.23■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Ftl2P49945 183 aa25.22■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Rhbdl3P58873 404 aa25.22■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Scn10aQ6QIY3 1958 aa25.22■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Tanc1Q0VGY8 1856 aa25.21■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Cfap44E9Q5M6 1843 aa25.21■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Zfp444Q3TDV8 331 aaKnown RBP25.21■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Slc10a5Q5PT54 434 aa25.21■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Rab3gap1Q80UJ7 981 aa25.21■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Polr3dQ91WD1 398 aa25.21■■□□□ 1.63
Ttc39b-201ENSMUST00000030205 Itgb7P26011 806 aa25.2■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Plekhf1Q3TB82 279 aa25.2■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Aldh1b1Q9CZS1 519 aa25.2■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 ParvgQ9ERD8 331 aa25.2■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Prr14lE9Q7C4 1971 aa25.19■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Tlr7P58681 1050 aa25.19■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Znf697Q569E7 569 aa25.19■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Sez6lQ6P1D5 963 aa25.19■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Snap47Q8R570 413 aa25.19■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Rnf181Q9CY62 165 aa25.19■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Traf5P70191 558 aa25.18■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Plbd2Q3TCN2 594 aa25.18■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Q3UPC7 1272 aa25.18■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Usp17ldG5E8G2 545 aa25.17■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Usp17lcG5E8I7 545 aa25.17■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Secisbp2lQ6A098 1086 aaKnown RBP25.17■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Mum1Q6DID5 682 aa25.17■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Podnl1Q6P3Y9 559 aa25.17■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Skint7A7XV04 395 aa25.16■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Fgl2P12804 432 aa25.16■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Ofd1Q80Z25 1017 aa25.16■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Phf23Q8BSN5 401 aa25.16■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Slc4a7Q8BTY2 1034 aa25.16■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Trmt44Q9D2Q2 713 aa25.16■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Sik3Q6P4S6 1311 aa25.15■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Adam39Q7M762 756 aa25.15■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 B3galt4Q9Z0F0 371 aa25.15■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Spata18Q0P557 537 aa25.14■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Zkscan8Q8BSL0 588 aa25.14■■□□□ 1.62
Ttc39b-201ENSMUST00000030205 Mast3Q3U214 1321 aa25.13■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Pde8bE9Q4S1 865 aa25.13■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Arid4aF8VPQ2 1261 aaKnown RBP25.13■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Myo1bP46735 1107 aa25.13■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Tgfb1i1Q62219 461 aa25.13■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Prl3d3A0A0M6L0J6 224 aa25.12■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Npr3P70180 536 aa25.12■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Trpv1Q704Y3 839 aa25.12■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Kcnc4Q8R1C0 628 aa25.12■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Ripk4Q9ERK0 786 aa25.12■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 LratQ9JI60 231 aa25.12■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 UncxO08934 530 aa25.11■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Gm5592Q3V0A6 857 aa25.11■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Irs4Q9Z0Y7 1216 aa25.11■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Zbtb3Q91X45 518 aa25.1■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Gimap3Q99MI6 301 aa25.1■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Pbx4Q99NE9 378 aa25.1■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Bcs1lQ9CZP5 418 aa25.1■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Nfe2l3Q9WTM4 660 aa25.1■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 S1pr4Q9Z0L1 386 aa25.1■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Col11a1Q61245 1804 aa25.09■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Prkg1P0C605 671 aa25.09■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 AppP12023 770 aa25.09■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Fam83bQ0VBM2 1012 aa25.09■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Rtp1Q8C8C1 263 aa25.09■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Myh15E9Q264 1925 aa25.09■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Tfcp2l1Q3UNW5 479 aa25.08■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Dhx38Q80X98 1228 aa25.08■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Nutm1Q8BHP2 1126 aa25.08■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Znf330Q922H9 316 aa25.08■■□□□ 1.61
Ttc39b-201ENSMUST00000030205 Ankrd63A2ARS0 390 aa25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Speer4dL7N216 212 aa25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Eya2O08575 532 aa25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 MycnP03966 462 aaKnown RBP25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Serpinb2P12388 415 aa25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Atp8a2P98200 1148 aa25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Tmprss11eQ5S248 423 aa25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Q8C5K5 320 aa25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Letm1Q9Z2I0 738 aa25.07■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Nova2D3YVV7 556 aaKnown RBP25.06■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Sult6b1P0CC03 303 aa25.06■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Ufl1Q8CCJ3 793 aaKnown RBP25.06■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Rgs19Q9CX84 216 aa25.06■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Myh4Q5SX39 1939 aa25.06■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Spg7Q3ULF4 781 aa25.05■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Psen2Q61144 448 aa25.05■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Sept9Q80UG5 583 aa25.05■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 SpidrQ8BGX7 933 aa25.05■■□□□ 1.6
Ttc39b-201ENSMUST00000030205 Fbxo3Q9DC63 480 aa25.05■■□□□ 1.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms