RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 COMMD2Q86X83 199 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 SOX7Q9BT81 388 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 HHLA2Q9UM44 414 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 PLEKHA6Q9Y2H5 1048 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 DHRS7CA6NNS2 312 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 HS3ST1O14792 307 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 MTRF1O75570 445 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 DHRS3O75911 302 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 IGHV3-13P01766 116 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 OR4A8P0C604 315 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 SELEP16581 610 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 KITLGP21583 273 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 DDOSTP39656 456 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 GSK3AP49840 483 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 KLF3P57682 345 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 SSX1Q16384 188 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 YIF1BQ5BJH7 314 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 RGP1Q92546 391 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 FBXW5Q969U6 566 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 FAM71F1Q96KD3 344 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 FZR1Q9UM11 496 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 V9GYS6 101 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 RAI1Q7Z5J4 1906 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 CD300LBA8K4G0 201 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 RAF1P04049 648 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 TFAP2AP05549 437 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 ZNF12P17014 697 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 SERPINF1P36955 418 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 LIPAP38571 399 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 EVX1P49640 407 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 SELENOVP59797 346 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 RPS11P62280 158 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 TNK1Q13470 666 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 EFNB3Q15768 340 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 TMEM255AQ5JRV8 349 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 MS4A15Q8N5U1 240 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 OR14K1Q8NGZ2 314 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 OR10AC1Q8NH08 325 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 GPR148Q8TDV2 347 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 MRPL37Q9BZE1 423 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 NDUFB11Q9NX14 153 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 SCOCQ9UIL1 159 aa16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 PURGQ9UJV8 347 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-221ENST00000622702 AKAP9Q99996 3911 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 GGT3PA6NGU5 568 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 IQCF6A8MYZ5 107 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 CCRL2O00421 344 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 DNASE1P24855 282 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 TTKP33981 857 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 MAP2K3P46734 347 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 PRSS12P56730 875 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 OR2T2Q6IF00 324 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 LRP11Q86VZ4 500 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 ZNF611Q8N823 705 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 OR56B2PQ8NGI1 322 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 OR51A4Q8NGJ6 313 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 PLK3Q9H4B4 646 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 DUSP13Q9UII6 198 aa16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 SF3B6Q9Y3B4 125 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-221ENST00000622702 TRBV5-5A0A0J9YX44 114 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 ACKR3P25106 362 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 PSMA1P25786 263 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 GABRA5P31644 462 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 ALDH3B2P48448 385 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 TRAM1Q15629 374 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 ZBTB37Q5TC79 503 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 C20orf204Q6ZNR8 217 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 KRT74Q7RTS7 529 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 SEMA6DQ8NFY4 1073 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 NINJ1Q92982 152 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 SYT3Q9BQG1 590 aa16.96■□□□□ 0.31
PDLIM2-221ENST00000622702 OTOGQ6ZRI0 2925 aa16.96■□□□□ 0.3
PDLIM2-221ENST00000622702 B9A039 149 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 RIPPLY1Q0D2K3 151 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 MOGQ16653 247 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 ALKBH6Q3KRA9 238 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 FBXL14Q8N1E6 418 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 MUC15Q8N387 334 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 CSNK2A3Q8NEV1 391 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 C10orf35Q96D05 121 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 TMED9Q9BVK6 235 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 ZNF275Q9NSD4 429 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 FAIMQ9NVQ4 179 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 MYEF2Q9P2K5 600 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 ITGB1BP2Q9UKP3 347 aa16.95■□□□□ 0.3
PDLIM2-221ENST00000622702 CCDC168Q8NDH2 2452 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 H3BSH0 61 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 TIMM8AO60220 97 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 RPS25P62851 125 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 MST1LQ2TV78 715 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 Q499Y3 187 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 FTMTQ8N4E7 242 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 OR13C3Q8NGS6 347 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 OR13C5Q8NGS8 318 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 MRPL15Q9P015 296 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 CGGBP1Q9UFW8 167 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 DHDHQ9UQ10 334 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 DSCAMO60469 2012 aa16.94■□□□□ 0.3
PDLIM2-221ENST00000622702 A0A1W2PPW3 197 aa16.93■□□□□ 0.3
PDLIM2-221ENST00000622702 SC5DO75845 299 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms