RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CPNE4Q96A23 557 aaPredicted RBP11.95□□□□□ -0.5
NEK3-205ENST00000610828 ABI3Q9P2A4 366 aa11.95□□□□□ -0.5
NEK3-205ENST00000610828 SLC23A1Q9UHI7 598 aa11.95□□□□□ -0.5
NEK3-205ENST00000610828 SGCEO43556 437 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 APOC1P02654 83 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 FAHP16930 419 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 UBE2MP61081 183 aaKnown RBP11.94□□□□□ -0.5
NEK3-205ENST00000610828 ECH1Q13011 328 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 OR1C1Q15619 314 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 NKPD1Q17RQ9 610 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 RTN4RL2Q86UN3 420 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 DTX1Q86Y01 620 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 BPIFB2Q8N4F0 458 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 OR5D18Q8NGL1 313 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 CHST6Q9GZX3 395 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 BANF2Q9H503 90 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 ZNF703Q9H7S9 590 aaPredicted RBP11.94□□□□□ -0.5
NEK3-205ENST00000610828 TMEM38BQ9NVV0 291 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 PLA2G3Q9NZ20 509 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 UPB1Q9UBR1 384 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 FBLN5Q9UBX5 448 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 A0A1W2PP11 408 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 ITGB2P05107 769 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 CELA3AP09093 270 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 PATE4P0C8F1 98 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 SRYQ05066 204 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 SNAI3Q3KNW1 292 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 SLC22A6Q4U2R8 563 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 CD163Q86VB7 1156 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 CDH26Q8IXH8 852 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 KCNG3Q8TAE7 436 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 CPT1CQ8TCG5 803 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 ADAMTS17Q8TE56 1095 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 C1orf147Q96MC9 270 aaPredicted RBP11.94□□□□□ -0.5
NEK3-205ENST00000610828 TMEM59Q9BXS4 323 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 LPAR5Q9H1C0 372 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 POFUT1Q9H488 388 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 B4GALT7Q9UBV7 327 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 ZNF107Q9UII5 783 aaPredicted RBP11.94□□□□□ -0.5
NEK3-205ENST00000610828 PIGLQ9Y2B2 252 aa11.94□□□□□ -0.5
NEK3-205ENST00000610828 ANKRD34BA5PLL1 514 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 G3V3Q6 166 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 STMND1H3BQB6 276 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 CDC14BO60729 498 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 CYTIPO60759 359 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 CRTAPO75718 401 aaPredicted RBP11.93□□□□□ -0.5
NEK3-205ENST00000610828 CD74P04233 296 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 HTR2BP41595 481 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SPEM2Q0P670 501 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 RAB35Q15286 201 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 KISS1Q15726 138 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 CEACAM16Q2WEN9 425 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SFRP5Q5T4F7 317 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 OR52W1Q6IF63 320 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 ZNF774Q6NX45 483 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 OR2W3Q7Z3T1 314 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 TMED4Q7Z7H5 227 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SULF2Q8IWU5 870 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 MUC20Q8N307 709 aaPredicted RBP11.93□□□□□ -0.5
NEK3-205ENST00000610828 IL22RA1Q8N6P7 574 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 PNLDC1Q8NA58 520 aaKnown RBP11.93□□□□□ -0.5
NEK3-205ENST00000610828 GPR137Q96N19 417 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SLC6A7Q99884 636 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 IFT46Q9NQC8 304 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 V9GYS6 101 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 A0A0A6YYD4 124 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 TMEM82A0PJX8 343 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 FAM166BA8MTA8 275 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SYNGR3O43761 229 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 MELTFP08582 738 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 CST2P09228 141 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 ZNF32P17041 273 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SSTR2P30874 369 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 THBS4P35443 961 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 GSK3AP49840 483 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 ZNF81P51508 661 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 UBE2V2Q15819 145 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 LGALSLQ3ZCW2 172 aaPredicted RBP11.93□□□□□ -0.5
NEK3-205ENST00000610828 RNASE10Q5GAN6 216 aaKnown RBP11.93□□□□□ -0.5
NEK3-205ENST00000610828 PDSS1Q5T2R2 415 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 OR8H1Q8NGG4 311 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SSC4DQ8WTU2 575 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 TNFAIP8L1Q8WVP5 186 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 FOXB1Q99853 325 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SLC25A21Q9BQT8 299 aaPredicted RBP11.93□□□□□ -0.5
NEK3-205ENST00000610828 OR10A2Q9H208 303 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 PIPOXQ9P0Z9 390 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 TTC28Q96AY4 2481 aa11.93□□□□□ -0.5
NEK3-205ENST00000610828 SOCS1O15524 211 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 TPD52L2O43399 206 aaKnown RBP11.92□□□□□ -0.5
NEK3-205ENST00000610828 MTRF1O75570 445 aaKnown RBP11.92□□□□□ -0.5
NEK3-205ENST00000610828 CHRM2P08172 466 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 GIPP09681 153 aaPredicted RBP11.92□□□□□ -0.5
NEK3-205ENST00000610828 MAGEA5P43359 124 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 TSPAN5P62079 268 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 SCRN3Q0VDG4 424 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 AIMP2Q13155 320 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms