RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SULT1B1O43704 296 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 NGFP01138 241 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 IGLV1-44P01699 117 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 BDKRB2P30411 391 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 MAP2K3P46734 347 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 GSK3AP49840 483 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 ZNF45Q02386 682 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 FAM166AQ6J272 317 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 S100PBPQ96BU1 408 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 MRI1Q9BV20 369 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 CHST5Q9GZS9 411 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 LIN7BQ9HAP6 207 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 PLGRKTQ9HBL7 147 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 SPATA2Q9UM82 520 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 OSGIN2Q9Y236 505 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 STARD10Q9Y365 291 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 J3QRK9 145 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 SLC17A2O00624 439 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 GK2Q14410 553 aaPredicted RBP17.97■□□□□ 0.47
PNKP-203ENST00000593946 UTS2BQ765I0 119 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 OR5AS1Q8N127 324 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 SAMD12Q8N8I0 201 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 OR5H6Q8NGV6 325 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 ZNF671Q8TAW3 534 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 LGALS14Q8TCE9 139 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 REPIN1Q9BWE0 567 aaKnown RBP17.97■□□□□ 0.47
PNKP-203ENST00000593946 ELOVL5Q9NYP7 299 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 STEAP1Q9UHE8 339 aa17.97■□□□□ 0.47
PNKP-203ENST00000593946 CACNA1BQ00975 2339 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 ALX3O95076 343 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 ERCC1P07992 297 aaPredicted RBP17.96■□□□□ 0.47
PNKP-203ENST00000593946 CALCBP10092 127 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 CLDN12P56749 244 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 FAM27E3Q08E93 113 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 RIPPLY1Q0D2K3 151 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 MALLQ13021 153 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 MRPL49Q13405 166 aaKnown RBP17.96■□□□□ 0.47
PNKP-203ENST00000593946 DCTN2Q13561 401 aaKnown RBP17.96■□□□□ 0.47
PNKP-203ENST00000593946 C1QTNF12Q5T7M4 302 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 RFPL4BQ6ZWI9 263 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 STEAP2Q8NFT2 490 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 OR52N4Q8NGI2 321 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 BORCS5Q969J3 196 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 DIRAS2Q96HU8 199 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 C1QTNF6Q9BXI9 259 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 CDH20Q9HBT6 801 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 MOV10Q9HCE1 1003 aaKnown RBP17.96■□□□□ 0.47
PNKP-203ENST00000593946 ADAM30Q9UKF2 790 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 V9GYH0 126 aa17.96■□□□□ 0.47
PNKP-203ENST00000593946 IGKV1-9A0A0C4DH69 117 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 ELK1P19419 428 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 CCKARP32238 428 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 EVX1P49640 407 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 PRSS12P56730 875 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 LRRC28Q86X40 367 aaPredicted RBP17.95■□□□□ 0.46
PNKP-203ENST00000593946 FOXRED1Q96CU9 486 aaPredicted RBP17.95■□□□□ 0.46
PNKP-203ENST00000593946 ACTR6Q9GZN1 396 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 OPA3Q9H6K4 179 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 CGGBP1Q9UFW8 167 aaPredicted RBP17.95■□□□□ 0.46
PNKP-203ENST00000593946 RHBDD3Q9Y3P4 386 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 ESPL1Q14674 2120 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 CECR9P0C854 216 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 CD40LGP29965 261 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 PPP5CP53041 499 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 SCAND1P57086 179 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 C1orf100Q5SVJ3 147 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 SSC4DQ8WTU2 575 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 ITFG2Q969R8 447 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 POFUT1Q9H488 388 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 METTL17Q9H7H0 456 aaPredicted RBP17.95■□□□□ 0.46
PNKP-203ENST00000593946 OR5V1Q9UGF6 321 aa17.95■□□□□ 0.46
PNKP-203ENST00000593946 CCL21O00585 134 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 SMPD2O60906 423 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 ALDOBP05062 364 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 EIF4EP06730 217 aaKnown RBP17.94■□□□□ 0.46
PNKP-203ENST00000593946 ZNF35P13682 527 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 UBE2V2Q15819 145 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 RAB11BQ15907 218 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 ZBTB37Q5TC79 503 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 TMEM42Q69YG0 159 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 CNIH2Q6PI25 160 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 CDH26Q8IXH8 852 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 JAGN1Q8N5M9 183 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 OR5L1Q8NGL2 311 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 OR6M1Q8NGM8 313 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 SLC25A28Q96A46 364 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 CMTM3Q96MX0 182 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 NKX3-1Q99801 234 aaPredicted RBP17.94■□□□□ 0.46
PNKP-203ENST00000593946 CYSLTR2Q9NS75 346 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 PTTG3PQ9NZH4 202 aa17.94■□□□□ 0.46
PNKP-203ENST00000593946 EIF3KQ9UBQ5 218 aaKnown RBP17.94■□□□□ 0.46
PNKP-203ENST00000593946 IGHV1-18A0A0C4DH31 117 aa17.93■□□□□ 0.46
PNKP-203ENST00000593946 APOA1P02647 267 aa17.93■□□□□ 0.46
PNKP-203ENST00000593946 HTR2CP28335 458 aa17.93■□□□□ 0.46
PNKP-203ENST00000593946 HLXQ14774 488 aaPredicted RBP17.93■□□□□ 0.46
PNKP-203ENST00000593946 TAB1Q15750 504 aa17.93■□□□□ 0.46
PNKP-203ENST00000593946 C3orf36Q3SXR2 165 aa17.93■□□□□ 0.46
PNKP-203ENST00000593946 MRPL21Q7Z2W9 205 aaKnown RBP17.93■□□□□ 0.46
PNKP-203ENST00000593946 CNTNAP3BQ96NU0 1288 aa17.93■□□□□ 0.46
PNKP-203ENST00000593946 SORCS2Q96PQ0 1159 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms