RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CSAG2Q9Y5P2 127 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 PTPRBP23467 1997 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 A0A0A6YYD4 124 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 A0A1B0GUH1 482 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 OR6C6A6NF89 314 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 PYCARD-AS1I3L0S3 204 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 FABP7O15540 132 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 SSNA1O43805 119 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 SULT1A3P0DMM9 295 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 SULT1A4P0DMN0 295 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 PRSS12P56730 875 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 ACTBP60709 375 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 ACTG1P63261 375 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 SCRN3Q0VDG4 424 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 UBE2V2Q15819 145 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 TMPRSS7Q7RTY8 843 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 FGD2Q7Z6J4 655 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 MEIOBQ8N635 442 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 CHST4Q8NCG5 386 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 WNT5BQ9H1J7 359 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 SCPEP1Q9HB40 452 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 SLC7A10Q9NS82 523 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 ZNF224Q9NZL3 707 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 PIGLQ9Y2B2 252 aa16.71■□□□□ 0.27
SMPD3-203ENST00000563226 MRPL33O75394 65 aaKnown RBP16.7■□□□□ 0.26
SMPD3-203ENST00000563226 CD82P27701 267 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 THBS4P35443 961 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 HTR5AP47898 357 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 SSBP1Q04837 148 aaKnown RBP16.7■□□□□ 0.26
SMPD3-203ENST00000563226 Q6ZSR3 168 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 SLC16A14Q7RTX9 510 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 OR5D18Q8NGL1 313 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 DEDD2Q8WXF8 326 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 GINS4Q9BRT9 223 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 OR2H1Q9GZK4 316 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 LPAR5Q9H1C0 372 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 SLCO5A1Q9H2Y9 848 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 BANF2Q9H503 90 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 CALHM2Q9HA72 323 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 FBLN5Q9UBX5 448 aa16.7■□□□□ 0.26
SMPD3-203ENST00000563226 KLRC4-KLRK1H3BQV0 150 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 M0QYG6 137 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 PRAF2O60831 178 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 TGM6O95932 706 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 APOC1P02654 83 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 GNB3P16520 340 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 WT1P19544 449 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-203ENST00000563226 ERP29P30040 261 aaKnown RBP16.69■□□□□ 0.26
SMPD3-203ENST00000563226 RBMS2Q15434 407 aaKnown RBP16.69■□□□□ 0.26
SMPD3-203ENST00000563226 KRTAP27-1Q3LI81 207 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 RNFT1Q5M7Z0 435 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 RAB12Q6IQ22 244 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 DRAM2Q6UX65 266 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 GLDNQ6ZMI3 551 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-203ENST00000563226 FJX1Q86VR8 437 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 ZFP62Q8NB50 900 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-203ENST00000563226 GPER1Q99527 375 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 TINAGL1Q9GZM7 467 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-203ENST00000563226 OR10A2Q9H208 303 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 ZNF552Q9H707 407 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-203ENST00000563226 LRP3O75074 770 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 SYNGR4O95473 234 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 MPIG6BO95866 241 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 VSIG10L2P0DP72 767 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 PRF1P14222 555 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 CD46P15529 392 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 ACKR3P25106 362 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 FOXG1P55316 489 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-203ENST00000563226 TAS2R19P59542 299 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 ARG2P78540 354 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 ECH1Q13011 328 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 CDNFQ49AH0 187 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 C9orf135Q5VTT2 229 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 C1QL2Q7Z5L3 287 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 TMEM229BQ8NBD8 167 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 NUDCD2Q8WVJ2 157 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 TMEM246Q9BRR3 403 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 DEFB127Q9H1M4 99 aa16.69■□□□□ 0.26
SMPD3-203ENST00000563226 RGS13O14921 159 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 CDC14BO60729 498 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 ANXA3P12429 323 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 MECP2P51608 486 aaKnown RBP16.68■□□□□ 0.26
SMPD3-203ENST00000563226 KISS1Q15726 138 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 METTL11BQ5VVY1 283 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 CDH26Q8IXH8 852 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 PRSS33Q8NF86 280 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 OR4S1Q8NGB4 309 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 OR52H1Q8NGJ2 320 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 ZFAND1Q8TCF1 268 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 CHST5Q9GZS9 411 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 TIMM10BQ9Y5J6 103 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 CNOT1A5YKK6 2376 aaKnown RBP16.68■□□□□ 0.26
SMPD3-203ENST00000563226 MMP7P09237 267 aaPredicted RBP16.68■□□□□ 0.26
SMPD3-203ENST00000563226 NUBP1P53384 320 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 SLC22A6Q4U2R8 563 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 ZNF766Q5HY98 468 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 LAMTOR1Q6IAA8 161 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 SEZ6L2Q6UXD5 910 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 OR2W3Q7Z3T1 314 aa16.68■□□□□ 0.26
SMPD3-203ENST00000563226 CDH24Q86UP0 819 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms