RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 AKAP1Q92667 903 aaKnown RBP eCLIP8.23□□□□□ -1.09
LINC00838-201ENST00000562956 SPTSSAQ969W0 71 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 AIFM2Q9BRQ8 373 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 DPCDQ9BVM2 203 aaPredicted RBP8.23□□□□□ -1.09
LINC00838-201ENST00000562956 BCO1Q9HAY6 547 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 MRPL15Q9P015 296 aaKnown RBP8.23□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF222Q9UK12 451 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 NUP50Q9UKX7 468 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 GGT3PA6NGU5 568 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 GABARAPH6UMI1 98 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 SULT1B1O43704 296 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 C1QBP02746 253 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 RAB3AP20336 220 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 MNDAP41218 407 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 FOXG1P55316 489 aaPredicted RBP8.23□□□□□ -1.09
LINC00838-201ENST00000562956 PSG4Q00888 419 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 KLF9Q13886 244 aaPredicted RBP8.23□□□□□ -1.09
LINC00838-201ENST00000562956 SNAI3Q3KNW1 292 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 PLA1AQ53H76 456 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 C9orf135Q5VTT2 229 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 OR10K2Q6IF99 312 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 CHMP1BQ7LBR1 199 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 SLC16A14Q7RTX9 510 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 OR14K1Q8NGZ2 314 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 SORCS2Q96PQ0 1159 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 SPACA5Q96QH8 159 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 PLEKHA1Q9HB21 404 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 PARPBPQ9NWS1 579 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF724A8MTY0 619 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 PROB1E7EW31 1015 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 SLC22A5O76082 557 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 TGM6O95932 706 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 CPN1P15169 458 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 DMRTC1Q5HYR2 192 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 OR5AS1Q8N127 324 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 OR1F12Q8NHA8 337 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 FCAMRQ8WWV6 532 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 GAL3ST1Q99999 423 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 TRAF4Q9BUZ4 470 aaPredicted RBP8.23□□□□□ -1.09
LINC00838-201ENST00000562956 LINC00470Q9BZP3 86 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 OR2H1Q9GZK4 316 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 WNT5BQ9H1J7 359 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 ATG5Q9H1Y0 275 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 TIMM10BQ9Y5J6 103 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 AKAP13Q12802 2813 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 A0A0U1RQV5 110 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 OR6C6A6NF89 314 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 LDLRAD4O15165 306 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 ZNHIT1O43257 154 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 MT-ND4P03905 459 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 ARF1P84077 181 aaKnown RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 SCRN3Q0VDG4 424 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 RNPS1Q15287 305 aaKnown RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 FAM122CQ6P4D5 195 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 NUFIP2Q7Z417 695 aaKnown RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 ADGRE4PQ86SQ3 457 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 TCTE3Q8IZS6 198 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 FOXRED1Q96CU9 486 aaPredicted RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 MARVELD1Q9BSK0 173 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 MS4A7Q9GZW8 240 aaPredicted RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 METTL17Q9H7H0 456 aaPredicted RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 EIF3KQ9UBQ5 218 aaKnown RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 MGAT4AQ9UM21 535 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 TRAV18A0A075B6X5 111 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 A0A096LPE4 126 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 IGKV1-9A0A0C4DH69 117 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 A0A1W2PPZ6 126 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 MMP7P09237 267 aaPredicted RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 TRAPPC2P0DI81 140 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 TRAPPC2BP0DI82 140 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 IL32P24001 234 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 HTR5AP47898 357 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 MAB21L1Q13394 359 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 KRTAP27-1Q3LI81 207 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 ZBTB37Q5TC79 503 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF680Q8NEM1 530 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF431Q8TF32 576 aaPredicted RBP8.22□□□□□ -1.09
LINC00838-201ENST00000562956 FBXW5Q969U6 566 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 APH1AQ96BI3 265 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 RNF122Q9H9V4 155 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 DIABLOQ9NR28 239 aa8.22□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF587BE7ETH6 402 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 RPL36A-HNRNPH2H7BZ11 118 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 CEACAM4O75871 244 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 DHRS3O75911 302 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 APOC1P02654 83 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 GABRA1P14867 456 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 GIFP27352 417 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF93P35789 620 aaPredicted RBP8.21□□□□□ -1.09
LINC00838-201ENST00000562956 CCR6P51684 374 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 PCBD1P61457 104 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 ECH1Q13011 328 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 SNTB2Q13425 540 aaKnown RBP8.21□□□□□ -1.09
LINC00838-201ENST00000562956 TNK1Q13470 666 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 DRAM2Q6UX65 266 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 DNM1P46Q6ZS02 220 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 PGAP1Q75T13 922 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 MCEMP1Q8IX19 187 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 C9orf62Q8N4C0 152 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms