RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SPATC1Q76KD6 591 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 SHFQ7M4L6 423 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 AQP12AQ8IXF9 295 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 UBE2FQ969M7 185 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 SPSB4Q96A44 273 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 UPRTQ96BW1 309 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 INTS14Q96SY0 518 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 MS4A7Q9GZW8 240 aaPredicted RBP13.5□□□□□ -0.25
DDX55-212ENST00000544738 N6AMT1Q9Y5N5 214 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 LGALS8O00214 317 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 NDUFA2O43678 99 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 SLC2A1P11166 492 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 CFL1P23528 166 aaKnown RBP13.49□□□□□ -0.25
DDX55-212ENST00000544738 PSMB10P40306 273 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 MTNR1AP48039 350 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 WDR25Q64LD2 544 aaPredicted RBP13.49□□□□□ -0.25
DDX55-212ENST00000544738 DPY19L4Q7Z388 723 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 ERI1Q8IV48 349 aaKnown RBP13.49□□□□□ -0.25
DDX55-212ENST00000544738 ADGRG5Q8IZF4 528 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 PARP8Q8N3A8 854 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 OR56B2PQ8NGI1 322 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 OR52H1Q8NGJ2 320 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 OR6N2Q8NGY6 317 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 RNF133Q8WVZ7 376 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 DACT3Q96B18 629 aaPredicted RBP13.49□□□□□ -0.25
DDX55-212ENST00000544738 OTULINQ96BN8 352 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 NUDT16L1Q9BRJ7 211 aaKnown RBP13.49□□□□□ -0.25
DDX55-212ENST00000544738 THTPAQ9BU02 230 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
DDX55-212ENST00000544738 DOCK11Q5JSL3 2073 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 TRAV38-1A0A0B4J264 116 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 FAM183AA6NL82 134 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 ANKRD30BLA7E2S9 258 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 TBX1O43435 398 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 GLCEO94923 617 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 GSTT1P30711 240 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 CX3CR1P49238 355 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 TIGD6Q17RP2 521 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 CD276Q5ZPR3 534 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 BRICD5Q6PL45 260 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 LYPD2Q6UXB3 125 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 ZNF841Q6ZN19 808 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 C9orf139Q6ZV77 190 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 CANT1Q8WVQ1 401 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 CLPTM1LQ96KA5 538 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 ABHD6Q9BV23 337 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 MMADHCQ9H3L0 296 aaPredicted RBP13.48□□□□□ -0.25
DDX55-212ENST00000544738 ZNF556Q9HAH1 456 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 C1orf123Q9NWV4 160 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 ERVK-18Q9QC07 812 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 MMP24Q9Y5R2 645 aa13.48□□□□□ -0.25
DDX55-212ENST00000544738 C5orf63A6NC05 138 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 A6NLC8 198 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 PRR23D1E9PI22 279 aaPredicted RBP13.47□□□□□ -0.25
DDX55-212ENST00000544738 ENSAO43768 121 aaKnown RBP13.47□□□□□ -0.25
DDX55-212ENST00000544738 PLATP00750 562 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 HMGN1P05114 100 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 LIPFP07098 398 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 ANXA2P07355 339 aaKnown RBP13.47□□□□□ -0.25
DDX55-212ENST00000544738 GRPP07492 148 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 PRR23D2P0DMB1 279 aaPredicted RBP13.47□□□□□ -0.25
DDX55-212ENST00000544738 ANOS1P23352 680 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 BPIFB3P59826 476 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 OR8B8Q15620 311 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 SNCBQ16143 134 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 SLC16A9Q7RTY1 509 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.47□□□□□ -0.25
DDX55-212ENST00000544738 IQCF1Q8N6M8 205 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 BOLLQ8N9W6 283 aaKnown RBP13.47□□□□□ -0.25
DDX55-212ENST00000544738 C19orf18Q8NEA5 215 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 OR8S1Q8NH09 359 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 WFDC12Q8WWY7 111 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 YY1AP1Q9H869 796 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 MED20Q9H944 212 aa13.47□□□□□ -0.25
DDX55-212ENST00000544738 OOEPA6NGQ2 149 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 CLDN34H7C241 214 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 TIMM23O14925 209 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 E2F6O75461 281 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 H2BFMP0C1H6 154 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 IGHV4-38-2P0DP08 117 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 OSMP13725 252 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 ANXA8P13928 327 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 POU1F1P28069 291 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 FAM3AP98173 230 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 GINS1Q14691 196 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 C11orf91Q3C1V1 193 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 DNAL1Q4LDG9 190 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 SFRP4Q6FHJ7 346 aaPredicted RBP13.46□□□□□ -0.25
DDX55-212ENST00000544738 TIGD4Q8IY51 512 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 FTMTQ8N4E7 242 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 CSNK2A3Q8NEV1 391 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 SGK3Q96BR1 496 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 REEP6Q96HR9 211 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 TECTBQ96PL2 329 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 RBM4BQ9BQ04 359 aaKnown RBP13.46□□□□□ -0.25
DDX55-212ENST00000544738 TEX12Q9BXU0 123 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 OR10A2Q9H208 303 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 OR51V1Q9H2C8 321 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms