RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 FAM98BQ52LJ0 330 aaKnown RBP13.95□□□□□ -0.18
CPSF1-207ENST00000531727 RUSC1-AS1Q66K80 236 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 SLC16A9Q7RTY1 509 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 FAM90A1Q86YD7 464 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 PNLDC1Q8NA58 520 aaKnown RBP13.95□□□□□ -0.18
CPSF1-207ENST00000531727 OR8S1Q8NH09 359 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 TAF15Q92804 592 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF1-207ENST00000531727 TMIGD2Q96BF3 282 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 INTS14Q96SY0 518 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 SP140LQ9H930 580 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 NOX4Q9NPH5 578 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 CMC2Q9NRP2 79 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 KIF17Q9P2E2 1029 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 ANXA2P07355 339 aaKnown RBP13.94□□□□□ -0.18
CPSF1-207ENST00000531727 MDKP21741 143 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-207ENST00000531727 HSD11B1P28845 292 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 GRK5P34947 590 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 TRIM25Q14258 630 aaKnown RBP13.94□□□□□ -0.18
CPSF1-207ENST00000531727 TEX36Q5VZQ5 186 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 CD300LDQ6UXZ3 194 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 Q6YL49 198 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 DPY19L4Q7Z388 723 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 OR6N2Q8NGY6 317 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 RNF133Q8WVZ7 376 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 SGK3Q96BR1 496 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 REEP6Q96HR9 211 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 NSL1Q96IY1 281 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 WDFY2Q96P53 400 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 NIPSNAP1Q9BPW8 284 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 SLITRK2Q9H156 845 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 RASSF4Q9H2L5 321 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 MED20Q9H944 212 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 KAAG1Q9UBP8 84 aa13.94□□□□□ -0.18
CPSF1-207ENST00000531727 TRRAPQ9Y4A5 3859 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 CENPVL3A0A0U1RRI6 287 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 FAM183AA6NL82 134 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 DVL1O14640 695 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 FCN3O75636 299 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 APOC1P02654 83 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 GSTT1P30711 240 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 MS4A2Q01362 244 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 GK3PQ14409 553 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 C11orf91Q3C1V1 193 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 METTL11BQ5VVY1 283 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 PRSS45Q7RTY3 260 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 WDR86Q86TI4 376 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 ERI1Q8IV48 349 aaKnown RBP13.93□□□□□ -0.18
CPSF1-207ENST00000531727 C11orf53Q8IXP5 236 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 OR10G2Q8NGC3 310 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 OR52H1Q8NGJ2 320 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 TEX47Q8TBZ9 253 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 ABHD6Q9BV23 337 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 SIRPDQ9H106 197 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 MARCH7Q9H992 704 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 RNPEPL1Q9HAU8 725 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 MMP24Q9Y5R2 645 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 MEGF8Q7Z7M0 2845 aa13.93□□□□□ -0.18
CPSF1-207ENST00000531727 IGHV3OR15-7A0A075B7D8 119 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 hCG_38984A0A1B0GV85 526 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 FAM181BA6NEQ2 426 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 TIPRLO75663 272 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 GLCEO94923 617 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 ECDO95905 644 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-207ENST00000531727 MELTFP08582 738 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 OMGP23515 440 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 CFL1P23528 166 aaKnown RBP13.92□□□□□ -0.18
CPSF1-207ENST00000531727 ZNF121P58317 390 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-207ENST00000531727 POU4F2Q12837 409 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 PDCD1Q15116 288 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 FAM57BQ71RH2 274 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 BTN2A1Q7KYR7 527 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 RHOUQ7L0Q8 258 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 SHFQ7M4L6 423 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 TIGD4Q8IY51 512 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 TMEM86BQ8N661 226 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 IQCF1Q8N6M8 205 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 OR1M1Q8NGA1 313 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 LRRC29Q8WV35 223 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 GATAD2BQ8WXI9 593 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 OTULINQ96BN8 352 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 FAM71F1Q96KD3 344 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-207ENST00000531727 TNFRSF19Q9NS68 423 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 DNAJC27Q9NZQ0 273 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 PKD1L1Q8TDX9 2849 aa13.92□□□□□ -0.18
CPSF1-207ENST00000531727 ARRDC5A6NEK1 342 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 H3BN98 237 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 RAP2AP10114 183 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 MUC1P15941 1255 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-207ENST00000531727 OPRL1P41146 370 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 GSK3AP49840 483 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 MICBQ29980 383 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 KLHL12Q53G59 568 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 FIP1L1Q6UN15 594 aaKnown RBP13.91□□□□□ -0.18
CPSF1-207ENST00000531727 CSNK2A3Q8NEV1 391 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 GIPC3Q8TF64 312 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 ST8SIA4Q92187 359 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 LHX4Q969G2 390 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 ASB9Q96DX5 294 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 AMELYQ99218 206 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms