RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 HAVCR1Q96D42 359 aa11.73□□□□□ -0.53
CD44-224ENST00000526669 SMIM19Q96E16 107 aa11.73□□□□□ -0.53
CD44-224ENST00000526669 TRAF4Q9BUZ4 470 aaPredicted RBP11.73□□□□□ -0.53
CD44-224ENST00000526669 MSL2Q9HCI7 577 aa11.73□□□□□ -0.53
CD44-224ENST00000526669 FAIMQ9NVQ4 179 aa11.73□□□□□ -0.53
CD44-224ENST00000526669 TMEM212A6NML5 194 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 IQCF6A8MYZ5 107 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 B9A039 149 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 NAT2P11245 290 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 FAHP16930 419 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 KITLGP21583 273 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 CDKN1AP38936 164 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 ARMCX4Q5H9R4 360 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 TMEM244Q5VVB8 128 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 UBE2UQ5VVX9 321 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 AGAP6Q5VW22 663 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 C11orf71Q6IPW1 123 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 DOK3Q7L591 496 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 EGFL6Q8IUX8 553 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 ZCCHC24Q8N2G6 241 aaKnown RBP11.72□□□□□ -0.53
CD44-224ENST00000526669 OR14K1Q8NGZ2 314 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 HAVCR2Q8TDQ0 301 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 TSEN15Q8WW01 171 aaKnown RBP11.72□□□□□ -0.53
CD44-224ENST00000526669 PGLYRP3Q96LB9 341 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 MGLLQ99685 303 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 TPK1Q9H3S4 243 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 RGCCQ9H4X1 137 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 OPA3Q9H6K4 179 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 PPP1R3EQ9H7J1 279 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 DYNLRB1Q9NP97 96 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 CBLN4Q9NTU7 201 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 PIGLQ9Y2B2 252 aa11.72□□□□□ -0.53
CD44-224ENST00000526669 FLNBO75369 2602 aaKnown RBP11.71□□□□□ -0.53
CD44-224ENST00000526669 MAGEA13PA6NCF6 341 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 ZSCAN5BA6NJL1 495 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 H0YL77 283 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 DHRS3O75911 302 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 SELEP16581 610 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 CCL1P22362 96 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 TUBG1P23258 451 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 CFL1P23528 166 aaKnown RBP11.71□□□□□ -0.53
CD44-224ENST00000526669 MAP2K3P46734 347 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 SOX2P48431 317 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 SNRPD2P62316 118 aaKnown RBP11.71□□□□□ -0.53
CD44-224ENST00000526669 RPS25P62851 125 aaKnown RBP11.71□□□□□ -0.53
CD44-224ENST00000526669 BDH1Q02338 343 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 ACSM1Q08AH1 577 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 MLLT11Q13015 90 aaPredicted RBP11.71□□□□□ -0.53
CD44-224ENST00000526669 OR8B8Q15620 311 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 EFNB3Q15768 340 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 SWI5Q1ZZU3 235 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 DMRTC1Q5HYR2 192 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 C20orf204Q6ZNR8 217 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 Q6ZR03 302 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 DTX2Q86UW9 622 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 SEMA6DQ8NFY4 1073 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 OR13C3Q8NGS6 347 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 GHSRQ92847 366 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 CCL19Q99731 98 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 TMED9Q9BVK6 235 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 CACNG6Q9BXT2 260 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 TUBG2Q9NRH3 451 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 GPR160Q9UJ42 338 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 ZNF391Q9UJN7 358 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 HHLA2Q9UM44 414 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 PLEKHA6Q9Y2H5 1048 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 ZNF281Q9Y2X9 895 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 V9GYS6 101 aa11.71□□□□□ -0.53
CD44-224ENST00000526669 M0R233 179 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 SPRY3O43610 288 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 PLPP2O43688 288 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 HLA-DPB1P04440 258 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 CPEP16870 476 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 CA6P23280 308 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 MMP15P51511 669 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 GP2P55259 537 aaKnown RBP11.7□□□□□ -0.54
CD44-224ENST00000526669 SSX1Q16384 188 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 PAMR1Q6UXH9 720 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 PLPP7Q8NBV4 271 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 OR8G5Q8NG78 346 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 OR10AD1Q8NGE0 317 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 PIGCQ92535 297 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 FCGR1BQ92637 280 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 MUL1Q969V5 352 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 ORAI1Q96D31 301 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 VRK1Q99986 396 aaPredicted RBP11.7□□□□□ -0.54
CD44-224ENST00000526669 PAPOLGQ9BWT3 736 aaKnown RBP11.7□□□□□ -0.54
CD44-224ENST00000526669 MRPS26Q9BYN8 205 aaKnown RBP11.7□□□□□ -0.54
CD44-224ENST00000526669 PLEKHA1Q9HB21 404 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 VCX3AQ9NNX9 186 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 ISYNA1Q9NPH2 558 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 GPR173Q9NS66 373 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 RHBDD3Q9Y3P4 386 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 DOCK11Q5JSL3 2073 aa11.7□□□□□ -0.54
CD44-224ENST00000526669 PLSCR5A0PG75 271 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 TRIM64CA6NLI5 447 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 ANKRD30BLA7E2S9 258 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 ZNF850A8MQ14 1090 aa11.69□□□□□ -0.54
CD44-224ENST00000526669 MLNRO43193 412 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms