RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PSMB10P40306 273 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 CX3CR1P49238 355 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 FGF12P61328 243 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 SHFQ7M4L6 423 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 HS3ST5Q8IZT8 346 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 FTMTQ8N4E7 242 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 PNLDC1Q8NA58 520 aaKnown RBP11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 OR56B2PQ8NGI1 322 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 OR6N2Q8NGY6 317 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 CCDC124Q96CT7 223 aaKnown RBP11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 ZNF319Q9P2F9 582 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 PCDHGB1Q9Y5G3 927 aa11.15□□□□□ -0.62
CTDSP1-212ENST00000494067 POM121CA8CG34 1229 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 P2RY10O00398 339 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 TIPRLO75663 272 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 TOX4O94842 621 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 PTBP3O95758 552 aaKnown RBP11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 RAP2AP10114 183 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 EGR1P18146 543 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 ELF3P78545 371 aaPredicted RBP11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 SLC9A3R2Q15599 337 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 KLHL12Q53G59 568 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 METTL11BQ5VVY1 283 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 C16orf87Q6PH81 154 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 PRSS45Q7RTY3 260 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 WDR86Q86TI4 376 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 ERI1Q8IV48 349 aaKnown RBP11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 OR10G2Q8NGC3 310 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 OR52H1Q8NGJ2 320 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 GIPC3Q8TF64 312 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 INTS14Q96SY0 518 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 PCGF1Q9BSM1 259 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 TEX12Q9BXU0 123 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 OR10A2Q9H208 303 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 ZNF556Q9HAH1 456 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 CMC2Q9NRP2 79 aa11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 PRPF19Q9UMS4 504 aaKnown RBP11.14□□□□□ -0.63
CTDSP1-212ENST00000494067 MDFIC2A0A1B0GVS7 189 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 DHRS12A0PJE2 317 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 ANXA2P2A6NMY6 339 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 ZNF879B4DU55 563 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 C22orf46C9J442 243 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 TNFRSF13BO14836 293 aaPredicted RBP11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 ECDO95905 644 aaPredicted RBP11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 FAM107AO95990 144 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 CST1P01037 141 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 H2BFMP0C1H6 154 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 HOXB6P17509 224 aaKnown RBP11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 GSTT1P30711 240 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 NAA10P41227 235 aaPredicted RBP11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 MICBQ29980 383 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 ZNF826PQ6ZT77 177 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 RHOUQ7L0Q8 258 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 DPY19L4Q7Z388 723 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 FGFRL1Q8N441 504 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 CSNK2A3Q8NEV1 391 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 CANT1Q8WVQ1 401 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 SPSB4Q96A44 273 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 ASB9Q96DX5 294 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 REEP6Q96HR9 211 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 FEVQ99581 238 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 RGCCQ9H4X1 137 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 MARCH7Q9H992 704 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 UNKLQ9H9P5 680 aaKnown RBP11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 RNPEPL1Q9HAU8 725 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 SMURF1Q9HCE7 757 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 NOX4Q9NPH5 578 aa11.13□□□□□ -0.63
CTDSP1-212ENST00000494067 PRR23D1E9PI22 279 aaPredicted RBP11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 GLCEO94923 617 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 GYPAP02724 150 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 PRR23D2P0DMB1 279 aaPredicted RBP11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 PDCD1Q15116 288 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 CD300LDQ6UXZ3 194 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 BRD3OSQ6XYD6 125 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 FAM57BQ71RH2 274 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 SLC16A9Q7RTY1 509 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 SLC36A1Q7Z2H8 476 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 C11orf53Q8IXP5 236 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 TIGD4Q8IY51 512 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 CCDC197Q8NCU1 140 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 THEM6Q8WUY1 208 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 GATAD2BQ8WXI9 593 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 PGAM5Q96HS1 289 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 FAM71F1Q96KD3 344 aaPredicted RBP11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 ABHD6Q9BV23 337 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 CHID1Q9BWS9 393 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 OR51V1Q9H2C8 321 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 ABCB9Q9NP78 766 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 DNAJC27Q9NZQ0 273 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 KLHDC2Q9Y2U9 406 aa11.12□□□□□ -0.63
CTDSP1-212ENST00000494067 A0A1B0GUS0 222 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 A0A1B0GW55 424 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 ARRDC5A6NEK1 342 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 TMPRSS2O15393 492 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 HOXA3O43365 443 aaPredicted RBP11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 HMGN1P05114 100 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DUX4L2P0CJ85 424 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DUX4L3P0CJ86 424 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms