RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 MAGEA2P43356 314 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 OR1D4P47884 311 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 PRLHRP49683 370 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 UGT2B15P54855 530 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 ERVK11-1P61568 191 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 ACTA2P62736 377 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 RPL10AP62906 217 aaKnown RBP5.5□□□□□ -1.53
LRCH3-215ENST00000476664 ACTG2P63267 376 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 ACTC1P68032 377 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 ACTA1P68133 377 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 COL10A1Q03692 680 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 C2orf80Q0P641 193 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 MED21Q13503 144 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 KCTD19Q17RG1 926 aaPredicted RBP5.5□□□□□ -1.53
LRCH3-215ENST00000476664 NDUFAF6Q330K2 333 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 CT45A1Q5HYN5 189 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 THEM4Q5T1C6 240 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 GPRC6AQ5T6X5 926 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 CRIP3Q6Q6R5 217 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 LHFPL3Q86UP9 236 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 BOD1L2Q8IYS8 172 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 MCOLN2Q8IZK6 566 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 VKORC1L1Q8N0U8 176 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 ABHD12Q8N2K0 398 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 FTMTQ8N4E7 242 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 NUP37Q8NFH4 326 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 CT45A3Q8NHU0 189 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 NDRG1Q92597 394 aaKnown RBP5.5□□□□□ -1.53
LRCH3-215ENST00000476664 PGLYRP2Q96PD5 576 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 OR5B12Q96R08 314 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 MICU1Q9BPX6 476 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 TRIM51Q9BSJ1 452 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 CLEC7AQ9BXN2 247 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 CALN1Q9BXU9 219 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 AMBNQ9NP70 447 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 CTPS2Q9NRF8 586 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 ZFP57Q9NU63 452 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 MAT2BQ9NZL9 334 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 SPRR3Q9UBC9 169 aa5.5□□□□□ -1.53
LRCH3-215ENST00000476664 TEX48A0A1B0GUV7 120 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 A0A1B0GW55 424 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 PSMB11A5LHX3 300 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 TMEM150BA6NC51 233 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 GOLGA6L10A6NI86 522 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 A8MX80 341 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 SEC14L6B5MCN3 397 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 AQP9O43315 295 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 CYTH3O43739 400 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 GPX5O75715 221 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUX4L2P0CJ85 424 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUX4L3P0CJ86 424 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUX4L4P0CJ87 422 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUX4L5P0CJ88 424 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUX4L6P0CJ89 424 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUX4L7P0CJ90 424 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 ATP6V1B2P21281 511 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 RBM34P42696 430 aaKnown RBP5.49□□□□□ -1.53
LRCH3-215ENST00000476664 RPL29P47914 159 aaKnown RBP5.49□□□□□ -1.53
LRCH3-215ENST00000476664 ALDH3B2P48448 385 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 MLF1P58340 268 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DSCR9P59020 149 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 IFFO1Q0D2I5 559 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 KLF9Q13886 244 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-215ENST00000476664 UBE2SQ16763 222 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 EXOC3L4Q17RC7 722 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 VAX1Q5SQQ9 334 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUX4L9Q6RFH8 374 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-215ENST00000476664 TFAP2EQ6VUC0 442 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 TMEM150AQ86TG1 271 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 TMEM135Q86UB9 458 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 PIANPQ8IYJ0 282 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 Q8N3U1 123 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 ZNF557Q8N988 423 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUSP18Q8NEJ0 188 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 PHF10Q8WUB8 498 aaKnown RBP5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUS3LQ96G46 650 aaKnown RBP5.49□□□□□ -1.53
LRCH3-215ENST00000476664 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 CHIAQ9BZP6 476 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 ACTR6Q9GZN1 396 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 SPHK2Q9NRA0 654 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 ZNF446Q9NWS9 450 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 DUX4Q9UBX2 424 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 SPATA2Q9UM82 520 aa5.49□□□□□ -1.53
LRCH3-215ENST00000476664 PRRC2AP48634 2157 aaKnown RBP5.48□□□□□ -1.53
LRCH3-215ENST00000476664 MYH10P35580 1976 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 SCN8AQ9UQD0 1980 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 A0A0A6YYD5 115 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 ZNF705EA8MWA4 302 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-215ENST00000476664 hCG_2039718K7EN88 272 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 K7EQG2 157 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 TNFAIP8O95379 198 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 CATP04040 527 aaKnown RBP5.48□□□□□ -1.53
LRCH3-215ENST00000476664 OR4Q2P0C623 313 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 LIPCP11150 499 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 SHMT2P34897 504 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 XKP51811 444 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 KRTAP10-9P60411 292 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 UNC119Q13432 240 aa5.48□□□□□ -1.53
LRCH3-215ENST00000476664 MAD2L1BPQ15013 274 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-215ENST00000476664 ZBTB6Q15916 424 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms