RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FAM216BQ8N7L0 139 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 BEND2Q8NDZ0 799 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC26A10Q8NG04 563 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 OR2T6Q8NHC8 308 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 C8orf46Q8TAG6 207 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 WIPF2Q8TF74 440 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 C17orf50Q8WW18 174 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 ACOT11Q8WXI4 607 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 SLCO4A1Q96BD0 722 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 TLCD1Q96CP7 247 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 R3HDM4Q96D70 268 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 AJUBAQ96IF1 538 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 TSSK2Q96PF2 358 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 GPX7Q96SL4 187 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 CCL13Q99616 98 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 PITX2Q99697 317 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 ATF6BQ99941 703 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 DCTN5Q9BTE1 182 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC22A4Q9H015 551 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 NUAK2Q9H093 628 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 MMP28Q9H239 520 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 RABEP2Q9H5N1 569 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 RANBP3Q9H6Z4 567 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 PNRC2Q9NPJ4 139 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 C1orf123Q9NWV4 160 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 MRPL15Q9P015 296 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 RHCGQ9UBD6 479 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 DNAJB11Q9UBS4 358 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 PRPF19Q9UMS4 504 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 MAB21L2Q9Y586 359 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 SNX13Q9Y5W8 968 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 V9GYY5 206 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 HYDINQ4G0P3 5121 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 C3orf84H3BNL1 204 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 M0R135 149 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 SOCS2O14508 198 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 ACOT8O14734 319 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 CHST1O43916 411 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 NDUFB2O95178 105 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 TXNDC12O95881 172 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 IFNA14P01570 189 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 GRPP07492 148 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 VSIG10L2P0DP72 767 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 CD28P10747 220 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 SELLP14151 372 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 MUC1P15941 1255 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 AMY2BP19961 511 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 PAX6P26367 422 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 CRABP1P29762 137 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 IFNA8P32881 189 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 GGT2P36268 569 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 CDKN2AP42771 156 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 YAP1P46937 504 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 TGM4P49221 684 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 FXYD6P3P58550 94 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 ZNF92Q03936 586 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 EMX1Q04741 257 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 ECH1Q13011 328 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 TRAM2Q15035 370 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 LY6EQ16553 131 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 MICBQ29980 383 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 LRRC75BQ2VPJ9 315 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 ZBTB37Q5TC79 503 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 NCR3LG1Q68D85 454 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 STUMQ69YW2 141 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 TBPL2Q6SJ96 375 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 CCBE1Q6UXH8 406 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 ZNF730Q6ZMV8 503 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC36A1Q7Z2H8 476 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 TSEN54Q7Z6J9 526 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 VTCN1Q7Z7D3 282 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 WDR86Q86TI4 376 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 NDUFA11Q86Y39 141 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 LINC00346Q8IVM7 164 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 OR4F17Q8NGA8 305 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 OR8J3Q8NGG0 315 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 OR56B2PQ8NGI1 322 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 OR2AE1Q8NHA4 323 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC7A13Q8TCU3 470 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 TSPEARQ8WU66 669 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 STON2Q8WXE9 905 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 RORBQ92753 470 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 SEH1LQ96EE3 360 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 ZNF799Q96GE5 643 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 FAM46AQ96IP4 442 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 TPD52L3Q96J77 140 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 CLPTM1LQ96KA5 538 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 OR4F4Q96R69 305 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 SSX3Q99909 188 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 CITED2Q99967 270 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 FNDC11Q9BVV2 318 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 PARD6BQ9BYG5 372 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 NDEL1Q9GZM8 345 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 FAM234AQ9H0X4 552 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 METTL8Q9H825 291 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 ZNF702PQ9H963 129 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 RAB18Q9NP72 206 aa4.17□□□□□ -1.74
SNRNP40-204ENST00000474025 NRIP3Q9NQ35 241 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms