RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 OR6N2Q8NGY6 317 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 TEX47Q8TBZ9 253 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 FGF23Q9GZV9 251 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-211ENST00000467464 TOR3AQ9H497 397 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 ZMAT3Q9HA38 289 aaKnown RBP9.93□□□□□ -0.82
PTPRF-211ENST00000467464 KLHDC2Q9Y2U9 406 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 A0A1B0GW55 424 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 OOEPA6NGQ2 149 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 SELENOFO60613 162 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 SFTPBP07988 381 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DUX4L2P0CJ85 424 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DUX4L3P0CJ86 424 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DUX4L4P0CJ87 422 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DUX4L5P0CJ88 424 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DUX4L6P0CJ89 424 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DUX4L7P0CJ90 424 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 SLC2A5P22732 501 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 CFHR2P36980 270 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DDOSTP39656 456 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 NPY4RP50391 375 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 CSNK2BP67870 215 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 CDK5Q00535 292 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 TAF13Q15543 124 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 OR8B8Q15620 311 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DUX4L9Q6RFH8 374 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-211ENST00000467464 BRD3OSQ6XYD6 125 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 BBS1Q8NFJ9 593 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 OTOSQ8NHW6 89 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 TAF15Q92804 592 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTPRF-211ENST00000467464 SLC7A6OSQ96CW6 309 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-211ENST00000467464 ZMYND19Q96E35 227 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-211ENST00000467464 REEP6Q96HR9 211 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 TBX15Q96SF7 602 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 THTPAQ9BU02 230 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 MS4A7Q9GZW8 240 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-211ENST00000467464 TLNRD1Q9H1K6 362 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 FAM53CQ9NYF3 392 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DNAJC27Q9NZQ0 273 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 DUX4Q9UBX2 424 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 N6AMT1Q9Y5N5 214 aa9.92□□□□□ -0.82
PTPRF-211ENST00000467464 TRAV38-1A0A0B4J264 116 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 TCRBV3S1A0A5B6 114 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 H3BN98 237 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 TBX1O43435 398 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 ADAM20O43506 726 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 ENSAO43768 121 aaKnown RBP9.91□□□□□ -0.82
PTPRF-211ENST00000467464 GYPAP02724 150 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 ANXA2P07355 339 aaKnown RBP9.91□□□□□ -0.82
PTPRF-211ENST00000467464 GRPP07492 148 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 OSMP13725 252 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 PRKACGP22612 351 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 ACKR3P25106 362 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 SLC15A1P46059 708 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 GSK3AP49840 483 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 GINS1Q14691 196 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 DEFB112Q30KQ8 113 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 PLBD1Q6P4A8 553 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 WDR82Q6UXN9 313 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 RBMS3Q6XE24 437 aaKnown RBP9.91□□□□□ -0.82
PTPRF-211ENST00000467464 FAM57BQ71RH2 274 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 SHFQ7M4L6 423 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 FGFRL1Q8N441 504 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 BOLLQ8N9W6 283 aaKnown RBP9.91□□□□□ -0.82
PTPRF-211ENST00000467464 PAPD5Q8NDF8 572 aaKnown RBP9.91□□□□□ -0.82
PTPRF-211ENST00000467464 OR1M1Q8NGA1 313 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 ITPKCQ96DU7 683 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 LYZL4Q96KX0 146 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 LRGUKQ96M69 825 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 TECTBQ96PL2 329 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 ZNF747Q9BV97 191 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 SIRPDQ9H106 197 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 OR51V1Q9H2C8 321 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 RASSF4Q9H2L5 321 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 MMADHCQ9H3L0 296 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-211ENST00000467464 C14orf119Q9NWQ9 140 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 PDP1Q9P0J1 537 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-211ENST00000467464 KAAG1Q9UBP8 84 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 RHBDD3Q9Y3P4 386 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 PCDHGB1Q9Y5G3 927 aa9.91□□□□□ -0.82
PTPRF-211ENST00000467464 MEGF8Q7Z7M0 2845 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 IGHV3OR15-7A0A075B7D8 119 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.9□□□□□ -0.82
PTPRF-211ENST00000467464 ZNF879B4DU55 563 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 PRR23D1E9PI22 279 aaPredicted RBP9.9□□□□□ -0.82
PTPRF-211ENST00000467464 PRODHO43272 600 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 NDUFA2O43678 99 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 PRR23D2P0DMB1 279 aaPredicted RBP9.9□□□□□ -0.82
PTPRF-211ENST00000467464 AMY2BP19961 511 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 POU1F1P28069 291 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 HSD11B1P28845 292 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 MTNR1AP48039 350 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 POU4F2Q12837 409 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 FOXL1Q12952 345 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 KCNJ8Q15842 424 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 TIGD6Q17RP2 521 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 RUSC1-AS1Q66K80 236 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 KRT74Q7RTS7 529 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 CPOQ8IVL8 374 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 OR52H1Q8NGJ2 320 aa9.9□□□□□ -0.82
PTPRF-211ENST00000467464 SEH1LQ96EE3 360 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms