RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 E9PLN8 166 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 PRAMEF26H0Y7S4 382 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 H0YIZ8 118 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 TIAF1O95411 115 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 CLPSP04118 112 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 FGF2P09038 288 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 PGCP20142 388 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 CLRN1P58418 232 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 OR2B8PP59922 312 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 HACD4Q5VWC8 232 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 RBMS3Q6XE24 437 aaKnown RBP7.69□□□□□ -1.18
USP40-203ENST00000427112 C6orf201Q7Z4U5 140 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 TSTD1Q8NFU3 115 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 PHB2Q99623 299 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 GAREM1Q9H706 876 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 CLEC1BQ9P126 229 aa7.69□□□□□ -1.18
USP40-203ENST00000427112 TRBV5-7A0A0A0MS05 114 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 TEX13DA0A0J9YY54 714 aaPredicted RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 A8MXK9 166 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 NUDT21O43809 227 aaKnown RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 SLC34A2O95436 690 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 MBP02144 154 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 CPN1P15169 458 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 NAGAP17050 411 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 RABIFP47224 123 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 SNRPEP62304 92 aaKnown RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 FUT7Q11130 342 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 FAM76BQ5HYJ3 339 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 SP7Q8TDD2 431 aaPredicted RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 RNF128Q8TEB7 428 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 MRGPRFQ96AM1 343 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 PIGQQ9BRB3 760 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 RBM24Q9BX46 236 aaKnown RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 FGF21Q9NSA1 209 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 DZANK1Q9NVP4 752 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 UPB1Q9UBR1 384 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 TRBV11-1A0A0K0K1C0 115 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 A0A1W2PR80 420 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 RAB27BO00194 218 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 NSA2O95478 260 aaKnown RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 DDAH2O95865 285 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 ARG1P05089 322 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 IL5P05113 134 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 BLVRBP30043 206 aaPredicted RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 RFC3P40938 356 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 CASP6P55212 293 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 RIF1Q5UIP0 2472 aaKnown RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 MEX3BQ6ZN04 569 aaKnown RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 DTX1Q86Y01 620 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 PAQR4Q8N4S7 273 aaPredicted RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 ZSCAN4Q8NAM6 433 aaPredicted RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 HSD17B11Q8NBQ5 300 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 OR4K17Q8NGC6 315 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 OR5M8Q8NGP6 311 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 BSCL2Q96G97 398 aaPredicted RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 AKR1E2Q96JD6 320 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 PBOV1Q9GZY1 135 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 METTL7AQ9H8H3 244 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 RPS10P5Q9NQ39 176 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 MRPS28Q9Y2Q9 187 aaKnown RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 ETV7Q9Y603 341 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 PCNX1Q96RV3 2341 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 IGLV1-36A0A0B4J1U3 117 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 OR5H15A6NDH6 313 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 C2CD4DB7Z1M9 353 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 PLPP3O14495 311 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 PMS2P2O95744 297 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 IL33O95760 270 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 SPP1P10451 314 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 PPICP45877 212 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 CAPZBP47756 277 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 RAG2P55895 527 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 POLR2GP62487 172 aaKnown RBP eCLIP7.68□□□□□ -1.18
USP40-203ENST00000427112 RPP30P78346 268 aaKnown RBP7.68□□□□□ -1.18
USP40-203ENST00000427112 HSF1Q00613 529 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 TAF9Q16594 264 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 OR10G3Q8NGC4 313 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 TCTEX1D2Q8WW35 142 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 SLAMF9Q96A28 289 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 SGK3Q96BR1 496 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 POM121Q96HA1 1249 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 GABRG3Q99928 467 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 MIOXQ9UGB7 285 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 RNF215Q9Y6U7 377 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 URGCP-MRPS24S4R325 110 aa7.68□□□□□ -1.18
USP40-203ENST00000427112 CADP27708 2225 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 IGKV1D-8A0A087WSZ0 117 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 KIR2DS5A0A0G2JLQ3 304 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 A0A0G2JNG1 304 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 KIR2DS3K7RE56 304 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 YKT6O15498 198 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 TTRP02766 147 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 GUSBP08236 651 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 ZNF735P0CB33 412 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 GAAP10253 952 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 ZNF121P58317 390 aaPredicted RBP7.67□□□□□ -1.18
USP40-203ENST00000427112 PDZK1IP1Q13113 114 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 IL10RAQ13651 578 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 KIR2DS5Q14953 304 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 P4HA3Q7Z4N8 544 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms