RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SGK3Q96BR1 496 aa12.16□□□□□ -0.46
NIF3L1-205ENST00000409588 SLC7A6OSQ96CW6 309 aaPredicted RBP12.16□□□□□ -0.46
NIF3L1-205ENST00000409588 ADAT1Q9BUB4 502 aaKnown RBP12.16□□□□□ -0.46
NIF3L1-205ENST00000409588 RNPEPL1Q9HAU8 725 aa12.16□□□□□ -0.46
NIF3L1-205ENST00000409588 CLN8Q9UBY8 286 aa12.16□□□□□ -0.46
NIF3L1-205ENST00000409588 FAM183AA6NL82 134 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 LGALS8O00214 317 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 GSC2O15499 205 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 FAM20BO75063 409 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 FKBP6O75344 327 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 ANXA2P07355 339 aaKnown RBP12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 H2BFMP0C1H6 154 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 LORP23490 312 aaPredicted RBP12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 OPRL1P41146 370 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 PITPNBP48739 271 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 FAM3AP98173 230 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 PAX2Q02962 417 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 DEGS2Q6QHC5 323 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 LYPD4Q6UWN0 246 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 C12orf54Q6X4T0 127 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 SLC16A9Q7RTY1 509 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 PRSS45Q7RTY3 260 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 OR8S1Q8NH09 359 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 OR2AE1Q8NHA4 323 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 DMRTB1Q96MA1 342 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 PRRG3Q9BZD7 231 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 OR51V1Q9H2C8 321 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 ERVK-18Q9QC07 812 aa12.15□□□□□ -0.46
NIF3L1-205ENST00000409588 IGHV2-70DA0A0C4DH43 119 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 TMEM89A2RUT3 159 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 TBX1O43435 398 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 LHBP01229 141 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 CD80P33681 288 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 CFHR2P36980 270 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 NAA10P41227 235 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 MTNR1AP48039 350 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 SEC61A1P61619 476 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 ESRRGP62508 458 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 SRSF2Q01130 221 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 MPPED2Q15777 294 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 PLBD1Q6P4A8 553 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 KCTD18Q6PI47 426 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 C9orf139Q6ZV77 190 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 ZNF771Q7L3S4 317 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 CPOQ8IVL8 374 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 PARP8Q8N3A8 854 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 OR56B2PQ8NGI1 322 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 GCDHQ92947 438 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 UPRTQ96BW1 309 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 REEP6Q96HR9 211 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 YIPF3Q9GZM5 350 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 SLC25A19Q9HC21 320 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 UFSP2Q9NUQ7 469 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 ENOPH1Q9UHY7 261 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 N6AMT1Q9Y5N5 214 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 MPC1Q9Y5U8 109 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 TMEM14AQ9Y6G1 99 aa12.14□□□□□ -0.47
NIF3L1-205ENST00000409588 OOEPA6NGQ2 149 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 ECDO95905 644 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 SLC2A1P11166 492 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 PSKH1P11801 424 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 MUC1P15941 1255 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 DCTDP32321 178 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 GNALP38405 381 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 CRISP1P54107 249 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 ZNF121P58317 390 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 IL5RAQ01344 420 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 BNIP1Q12981 228 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 KLHL12Q53G59 568 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 DOK3Q7L591 496 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 GALNT4Q8N4A0 578 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 IQCF1Q8N6M8 205 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 THEM6Q8WUY1 208 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 DACT3Q96B18 629 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 SLC6A7Q99884 636 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 MS4A7Q9GZW8 240 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 MED20Q9H944 212 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 PAPOLBQ9NRJ5 636 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 KIF17Q9P2E2 1029 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 KAAG1Q9UBP8 84 aa12.13□□□□□ -0.47
NIF3L1-205ENST00000409588 ANXA2P2A6NMY6 339 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 CLDN34H7C241 214 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 TNFRSF13BO14836 293 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 ENSAO43768 121 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 ZNF254O75437 659 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 ZNF205O95201 554 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 GRPP07492 148 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 ATP6V1B1P15313 513 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 PRKACGP22612 351 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 GSK3AP49840 483 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 ACTR3P61158 418 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 ACTG1P63261 375 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 OR8B8Q15620 311 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 SNAPC1Q16533 368 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 MICBQ29980 383 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 LCN1P1Q5VSP4 162 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms