RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 WDR89Q96FK6 387 aaPredicted RBP9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 LINC00615Q96LM1 132 aaPredicted RBP9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 WDFY2Q96P53 400 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 OR4F4Q96R69 305 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 POMT2Q9UKY4 750 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 DSCR3O14972 297 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 SULT1A3P0DMM9 295 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 SULT1A4P0DMN0 295 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 SPNP16150 400 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 SELEP16581 610 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 SUB1P53999 127 aaKnown RBP eCLIP9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 AGBL4Q5VU57 503 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 LCN15Q6UWW0 184 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 ZNF66Q6ZN08 573 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 ADGRG3Q86Y34 549 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 ARHGEF39Q8N4T4 335 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 DTWD2Q8NBA8 298 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 TMEM229BQ8NBD8 167 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 OR2M7Q8NG81 312 aa9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 ACTR3CQ9C0K3 210 aaPredicted RBP9.29□□□□□ -0.92
LIMCH1-203ENST00000396595 A0A1B0GTL3 188 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 H0YIG0 161 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 TBXA2RP21731 343 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 AKR1C3P42330 323 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 UBE2G1P62253 170 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 M1APQ8TC57 530 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 SLC35E1Q96K37 410 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 FAAP24Q9BTP7 215 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 TMEM9BQ9NQ34 198 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 SLC22A13Q9Y226 551 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 LRP3O75074 770 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 GRPP07492 148 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 NKG7Q16617 165 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 PRSS36Q5K4E3 855 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 OR2A2Q6IF42 318 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 CISD2Q8N5K1 135 aaKnown RBP9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 ZNF321PQ8N8H1 164 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 MORN4Q8NDC4 146 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 C16orf52Q8NHV5 167 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 CDCP1Q9H5V8 836 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 CACNA1CQ13936 2221 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 CACNA1SQ13698 1873 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 SLC17A2O00624 439 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 GLI4P10075 376 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 GALP22466 123 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 OR1D5P58170 312 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 HES1Q14469 280 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 OR8B8Q15620 311 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 SLC25A35Q3KQZ1 300 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 ZNF628Q5EBL2 1059 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 SPANXN5Q5MJ07 72 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 RSPO2Q6UXX9 243 aaPredicted RBP9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 GLCCI1Q86VQ1 547 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 OR5AP2Q8NGF4 316 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 ASB16Q96NS5 453 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 RBM14Q96PK6 669 aaKnown RBP9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 IER2Q9BTL4 223 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 NXF2Q9GZY0 626 aaKnown RBP9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 MAST2Q6P0Q8 1798 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 OR2M5A3KFT3 312 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 ZNF98A6NK75 572 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 H3BVH4 76 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 GPR31O00270 319 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 PSMB2P49721 201 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 RAC1P63000 192 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 DHODHQ02127 395 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 LINC00303Q3SY05 128 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 ASTLQ6HA08 431 aaPredicted RBP9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 BHLHE23Q8NDY6 225 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 OR10P1Q8NGE3 313 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 MVB12AQ96EY5 273 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 DERL3Q96Q80 235 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 PBOV1Q9GZY1 135 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 RIMS4Q9H426 269 aaPredicted RBP9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 IGHV3-20A0A0C4DH32 117 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 HS3ST1O14792 307 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 SCGB1A1P11684 91 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 MAJINQ3KP22 176 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 STUMQ69YW2 141 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 XAF1Q6GPH4 301 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 LINC00696Q6ZRV3 163 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 THNSL2Q86YJ6 484 aa9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 CNRIP1Q96F85 164 aaPredicted RBP9.28□□□□□ -0.92
LIMCH1-203ENST00000396595 LRRC30A6NM36 301 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 XRCC2O43543 280 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 SSSCA1O60232 199 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 OPRM1P35372 400 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 TAS2R45P59539 299 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 PLP1P60201 277 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 SHBQ15464 509 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 PNLIPRP3Q17RR3 467 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 TIGITQ495A1 244 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 ZNF787Q6DD87 383 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 AKR1E2Q96JD6 320 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 SMIM7Q9BQ49 75 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 DLL4Q9NR61 685 aa9.27□□□□□ -0.92
LIMCH1-203ENST00000396595 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.27□□□□□ -0.93
LIMCH1-203ENST00000396595 A0A1W2PNV4 684 aa9.27□□□□□ -0.93
LIMCH1-203ENST00000396595 HRO43593 1189 aa9.27□□□□□ -0.93
LIMCH1-203ENST00000396595 NRASP01111 189 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms