RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CELA3BP08861 270 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 SELEP16581 610 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 RAB3AP20336 220 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 CCKARP32238 428 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 THBS4P35443 961 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 ZNF83P51522 516 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 CAV3P56539 151 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 NAAAQ02083 359 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 ZNF846Q147U1 533 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 BORCS5Q969J3 196 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 FOXRED1Q96CU9 486 aaPredicted RBP11.83□□□□□ -0.52
VAPB-202ENST00000395802 WDR12Q9GZL7 423 aaKnown RBP11.83□□□□□ -0.52
VAPB-202ENST00000395802 PIGLQ9Y2B2 252 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 ANXA2P2A6NMY6 339 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 H3BSH0 61 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 J3QRK9 145 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 CTDSP2O14595 271 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 PIN1P1O15428 100 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 SMPD2O60906 423 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 NCR1O76036 304 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 ALX3O95076 343 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 S100A5P33763 92 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 WNT5AP41221 380 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 RPS23P62266 143 aaKnown RBP11.82□□□□□ -0.52
VAPB-202ENST00000395802 FAM3AP98173 230 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 ZNF92Q03936 586 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 GK2Q14410 553 aaPredicted RBP11.82□□□□□ -0.52
VAPB-202ENST00000395802 OR8B8Q15620 311 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 ALKBH2Q6NS38 261 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 SEZ6L2Q6UXD5 910 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 ZNF101Q8IZC7 436 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 OR2AE1Q8NHA4 323 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 CPNE2Q96FN4 548 aaPredicted RBP11.82□□□□□ -0.52
VAPB-202ENST00000395802 LYZL4Q96KX0 146 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 MRI1Q9BV20 369 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 ZCCHC4Q9H5U6 513 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 ESRP2Q9H6T0 727 aaKnown RBP11.82□□□□□ -0.52
VAPB-202ENST00000395802 TMEM138Q9NPI0 162 aa11.82□□□□□ -0.52
VAPB-202ENST00000395802 RTTNQ86VV8 2226 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 IGHV2OR16-5A0A0B4J2B6 119 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 hCG_38984A0A1B0GV85 526 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 GGT3PA6NGU5 568 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 NOTOA8MTQ0 251 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 NGFP01138 241 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 EPXP11678 715 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 ETV6P41212 452 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 GSK3AP49840 483 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 PPP1CBP62140 327 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 GLT8D1Q68CQ7 371 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 FBXW12Q6X9E4 464 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 UTS2BQ765I0 119 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 PAQR4Q8N4S7 273 aaPredicted RBP11.81□□□□□ -0.52
VAPB-202ENST00000395802 OR1J1Q8NGS3 322 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 ACOT12Q8WYK0 555 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
VAPB-202ENST00000395802 RADILQ96JH8 1075 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 STARD10Q9Y365 291 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 V9GY05 133 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 CFAP46Q8IYW2 2715 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 ZFYVE26Q68DK2 2539 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 A0A0G2JK05 382 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 ZNF816-ZNF321PA0A0X1KG74 233 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 NKX2-6A6NCS4 301 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 TUBAL3A6NHL2 446 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 VSTM5A8MXK1 200 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 SULT1B1O43704 296 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 RAC2P15153 192 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 IGFBP3P17936 291 aaPredicted RBP11.81□□□□□ -0.52
VAPB-202ENST00000395802 CD40P25942 277 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 MAGEB1P43366 347 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 CAPZA1P52907 286 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 WFDC8Q8IUA0 241 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 CDH26Q8IXH8 852 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 CHST5Q9GZS9 411 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 KCNN3Q9UGI6 736 aa11.81□□□□□ -0.52
VAPB-202ENST00000395802 ANKRD61A6NGH8 418 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 MAS1P04201 325 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 PRB1P04280 392 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 FAM157BP0CG42 384 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 BDKRB2P30411 391 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 GCH1P30793 250 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 CNN3Q15417 329 aaKnown RBP11.8□□□□□ -0.52
VAPB-202ENST00000395802 ZNF718Q3SXZ3 478 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 CLVS2Q5SYC1 327 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 SFXN4Q6P4A7 337 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 MZT2AQ6P582 158 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 RFPL4BQ6ZWI9 263 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 CCDC190Q86UF4 302 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 MYPOPQ86VE0 399 aaPredicted RBP11.8□□□□□ -0.52
VAPB-202ENST00000395802 LAX1Q8IWV1 398 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 OR1M1Q8NGA1 313 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 ADAT3Q96EY9 351 aaPredicted RBP11.8□□□□□ -0.52
VAPB-202ENST00000395802 ZC3HAV1LQ96H79 300 aaKnown RBP11.8□□□□□ -0.52
VAPB-202ENST00000395802 WFIKKN1Q96NZ8 548 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 WDFY2Q96P53 400 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 ABCB9Q9NP78 766 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 TAS2R4Q9NYW5 299 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 PTTG3PQ9NZH4 202 aa11.8□□□□□ -0.52
VAPB-202ENST00000395802 NPAP1Q9NZP6 1156 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms