RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 NAXEQ8NCW5 288 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 OR51D1Q8NGF3 324 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 OR51E1Q8TCB6 317 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 CREB3L1Q96BA8 519 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 FGGYQ96C11 551 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 UQCC2Q9BRT2 126 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 GPR35Q9HC97 309 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 TMEM138Q9NPI0 162 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 GLRX2Q9NS18 164 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 FBLN5Q9UBX5 448 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 NOSIPQ9Y314 301 aaKnown RBP13.18□□□□□ -0.3
SCAF11-204ENST00000395454 OR6C65A6NJZ3 312 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 CD3GP09693 182 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 TMIGD3P0DMS9 266 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-204ENST00000395454 BDKRB2P30411 391 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 AGTR1P30556 359 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 TAS2R20P59543 309 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 FOXF2Q12947 444 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 PLA2G7Q13093 441 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 GLYATL3Q5SZD4 288 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 ZNF627Q7L945 461 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 BIVMQ86UB2 503 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 AKAP14Q86UN6 197 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 OR1M1Q8NGA1 313 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 OR5D14Q8NGL3 314 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 DEDD2Q8WXF8 326 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 UPRTQ96BW1 309 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 ALKBH3Q96Q83 286 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-204ENST00000395454 METTL17Q9H7H0 456 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-204ENST00000395454 GPR84Q9NQS5 396 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 SLC5A6Q9Y289 635 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 MRPS7Q9Y2R9 242 aaKnown RBP13.17□□□□□ -0.3
SCAF11-204ENST00000395454 FREM1Q5H8C1 2179 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 MYO18BQ8IUG5 2567 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 A0A0A6YYH2 397 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 TMEM272A0A1B0GTI8 110 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 OR6C6A6NF89 314 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 GGT3PA6NGU5 568 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 A6NJ64 397 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 SYNGR3O43761 229 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 ORC5O43913 435 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 DOK2O60496 412 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 SS18L1O75177 396 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-204ENST00000395454 RANBP1P43487 201 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 EFNB2P52799 333 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 SCRN3Q0VDG4 424 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 TMEM211Q6ICI0 200 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 PGAP1Q75T13 922 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 FAM214BQ7L5A3 538 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 ABHD12BQ7Z5M8 362 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-204ENST00000395454 IZUMO1Q8IYV9 350 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 TOMM5Q8N4H5 51 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 ZNF283Q8N7M2 679 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 RND1Q92730 232 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 SORCS2Q96PQ0 1159 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 DMRTA2Q96SC8 542 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 FOXB1Q99853 325 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 SLCO5A1Q9H2Y9 848 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 C12orf49Q9H741 205 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 AUNIPQ9H7T9 357 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 GP6Q9HCN6 339 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 PARPBPQ9NWS1 579 aa13.17□□□□□ -0.3
SCAF11-204ENST00000395454 PYCARD-AS1I3L0S3 204 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 MRPL33O75394 65 aaKnown RBP13.16□□□□□ -0.3
SCAF11-204ENST00000395454 ALX3O95076 343 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 ERCC1P07992 297 aaPredicted RBP13.16□□□□□ -0.3
SCAF11-204ENST00000395454 RAB6AP20340 208 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 HLA-DMAP28067 261 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 CEACAM8P31997 349 aaPredicted RBP13.16□□□□□ -0.3
SCAF11-204ENST00000395454 GDNFP39905 211 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 BTG1P62324 171 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 SPOCK1Q08629 439 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.16□□□□□ -0.3
SCAF11-204ENST00000395454 LUZP2Q86TE4 346 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 UBE2J2Q8N2K1 259 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 LRRC18Q8N456 261 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 OR14K1Q8NGZ2 314 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 HPS1Q92902 700 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 COPZ2Q9P299 210 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 NLKQ9UBE8 527 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 ATPIF1Q9UII2 106 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 RTTNQ86VV8 2226 aa13.16□□□□□ -0.3
SCAF11-204ENST00000395454 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 A0A1B0GUH1 482 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 DHRS7CA6NNS2 312 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 KRT33AO76009 404 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 ECDO95905 644 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-204ENST00000395454 ALDOBP05062 364 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 SLC2A1P11166 492 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 RAB3AP20336 220 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 KIR2DL2P43627 348 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-204ENST00000395454 CEACAM16Q2WEN9 425 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 VWA1Q6PCB0 445 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 DRAM2Q6UX65 266 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 FAM57BQ71RH2 274 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 OR5AS1Q8N127 324 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 SLC22A24Q8N4F4 322 aa13.15□□□□□ -0.3
SCAF11-204ENST00000395454 OR52H1Q8NGJ2 320 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms