RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 LIPNQ5VXI9 398 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 C16orf47Q6ZP98 133 aaPredicted RBP14.75□□□□□ -0.05
RGP1-201ENST00000378078 UBE3DQ7Z6J8 389 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 DDOQ99489 341 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 UBQLN3Q9H347 655 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 OR2T2Q6IF00 324 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 PAQR9Q6ZVX9 377 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 OR13C8Q8NGS7 320 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 C16orf52Q8NHV5 167 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 BTF3L4Q96K17 158 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 H0YIV9 168 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 NEURL1O76050 574 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 TGFBR1P36897 503 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 FA2HQ7L5A8 372 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 PTPMT1Q8WUK0 201 aaPredicted RBP14.75□□□□□ -0.05
RGP1-201ENST00000378078 RNF2Q99496 336 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 ATP6V1G2-DDX39BF2Z307 99 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 ACOT8O14734 319 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 ADPRHL1Q8NDY3 354 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 MARCH1Q8TCQ1 289 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 DTD1Q8TEA8 209 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 OXGR1Q96P68 337 aa14.75□□□□□ -0.05
RGP1-201ENST00000378078 TRABD2BA6NFA1 517 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 ALPLP05186 524 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 CHRM2P08172 466 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 SPRED3Q2MJR0 410 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 CORINQ9Y5Q5 1042 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 SETD1AO15047 1707 aaKnown RBP14.74□□□□□ -0.05
RGP1-201ENST00000378078 HMGN4O00479 90 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 ACHEP22303 614 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 RELAQ04206 551 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 CEACAM16Q2WEN9 425 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.74□□□□□ -0.05
RGP1-201ENST00000378078 CHODLQ9H9P2 273 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 ETV7Q9Y603 341 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 MBLAC1A4D2B0 266 aaPredicted RBP14.74□□□□□ -0.05
RGP1-201ENST00000378078 ZNHIT1O43257 154 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 ZNF354AO60765 605 aaPredicted RBP14.74□□□□□ -0.05
RGP1-201ENST00000378078 MT-ATP6P00846 226 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 OR5H8P0DN80 308 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 MTNR1BP49286 362 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 GUCA2AQ02747 115 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 SP6Q3SY56 376 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 TAAR9Q96RI9 348 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 UCK1Q9HA47 277 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 ZNF207O43670 478 aaKnown RBP14.74□□□□□ -0.05
RGP1-201ENST00000378078 LIMK1P53667 647 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 SNRPGP62308 76 aaKnown RBP14.74□□□□□ -0.05
RGP1-201ENST00000378078 OR2F1Q13607 317 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 HMGN3Q15651 99 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 TRNP1Q6NT89 227 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 GDPGP1Q6ZNW5 385 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 TMEM147Q9BVK8 224 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 PSORS1C1Q9UIG5 152 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 GDF2Q9UK05 429 aaPredicted RBP14.74□□□□□ -0.05
RGP1-201ENST00000378078 CD200P41217 278 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 RFX2P48378 723 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 DGCR2P98153 550 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 XKR7Q5GH72 579 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 FIZ1Q96SL8 496 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 SDF2Q99470 211 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 GABARAPL1Q9H0R8 117 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 SLCO1C1Q9NYB5 712 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 LSRQ86X29 649 aaPredicted RBP14.74□□□□□ -0.05
RGP1-201ENST00000378078 COMMD1Q8N668 190 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 MARC2Q969Z3 335 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 CLDN23Q96B33 292 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 ZNF764Q96H86 408 aaPredicted RBP14.74□□□□□ -0.05
RGP1-201ENST00000378078 SLC26A1Q9H2B4 701 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 LIPGQ9Y5X9 500 aa14.74□□□□□ -0.05
RGP1-201ENST00000378078 ZBTB25P24278 435 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 IHHQ14623 411 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 TMEM97Q5BJF2 176 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 BCL2L2Q92843 193 aaPredicted RBP14.73□□□□□ -0.05
RGP1-201ENST00000378078 VIRMAQ69YN4 1812 aaKnown RBP14.73□□□□□ -0.05
RGP1-201ENST00000378078 IGHV3OR15-7A0A075B7D8 119 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 IGKV3D-11A0A0A0MRZ8 115 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 TMPRSS2O15393 492 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 IGKV3-11P04433 115 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 IL5P05113 134 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 RAB1AP62820 205 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 MFSD4AQ8N468 514 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 ARHGDIGQ99819 225 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 TMEM140Q9NV12 185 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 CST7O76096 145 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 SRFP11831 508 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 CPN1P15169 458 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 RBPMS2Q6ZRY4 209 aaKnown RBP14.73□□□□□ -0.05
RGP1-201ENST00000378078 OR4C3Q8NH37 302 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 DLL4Q9NR61 685 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 RFPL4AA6NLU0 287 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 RFPL4AL1F8VTS6 287 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 S100A11P31949 105 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 RELL2Q8NC24 303 aaPredicted RBP14.73□□□□□ -0.05
RGP1-201ENST00000378078 PSG11Q9UQ72 335 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 TRAV34A0A0B4J273 112 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 TCRBV3S1A0A5B6 114 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 SDHAP31040 664 aa14.73□□□□□ -0.05
RGP1-201ENST00000378078 RSPO2Q6UXX9 243 aaPredicted RBP14.73□□□□□ -0.05
RGP1-201ENST00000378078 NHLRC2Q8NBF2 726 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms