RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ACER2Q5QJU3 275 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 OR2W3Q7Z3T1 314 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 C20orf196Q8IYI0 205 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 FXYD6Q9H0Q3 95 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 DEPPQ9NTK1 212 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 DOCK10Q96BY6 2186 aa16.46■□□□□ 0.22
USP49-202ENST00000373010 RPS10-NUDT3A0A1W2PQS6 291 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 LINC00862A6NCI5 91 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 LRRC3CA6NJW4 275 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 GJE1A6NN92 205 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 IGLV3-1P01715 115 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 CASRP41180 1078 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 SUCLG1P53597 346 aaKnown RBP16.45■□□□□ 0.22
USP49-202ENST00000373010 HIST1H3AP68431 136 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 HIST2H3PS2Q5TEC6 136 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 HIST2H3AQ71DI3 136 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 RAB11FIP2Q7L804 512 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 GGNQ86UU5 652 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 KCNG3Q8TAE7 436 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 SSC4DQ8WTU2 575 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 ROBO4Q8WZ75 1007 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 PLEK2Q9NYT0 353 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 CRTAPO75718 401 aaPredicted RBP16.45■□□□□ 0.22
USP49-202ENST00000373010 TRAPPC6AO75865 159 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 SCGNO76038 276 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 HPP00738 406 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 ICAM2P13598 275 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 FAHP16930 419 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 ZNF84P51523 738 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 CARD18P57730 90 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 RAC3P60763 192 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 DHRS2Q13268 280 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 WIPI1Q5MNZ9 446 aaPredicted RBP16.45■□□□□ 0.22
USP49-202ENST00000373010 LY6G6FQ5SQ64 297 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 DTWD2Q8NBA8 298 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 PRRT1Q99946 306 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 TMEM59Q9BXS4 323 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 P4HTMQ9NXG6 502 aa16.45■□□□□ 0.22
USP49-202ENST00000373010 CXCL13O43927 109 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 PMP2P02689 132 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 GSK3AP49840 483 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 MPPED2Q15777 294 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 ESCO2Q56NI9 601 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 SFRP5Q5T4F7 317 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 CRIP3Q6Q6R5 217 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 DBX2Q6ZNG2 339 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 C1QL2Q7Z5L3 287 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 STEAP2Q8NFT2 490 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 RAB3CQ96E17 227 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 MYOZ1Q9NP98 299 aaPredicted RBP16.44■□□□□ 0.22
USP49-202ENST00000373010 SLC2A8Q9NY64 477 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 ZNF230Q9UIE0 474 aaPredicted RBP16.44■□□□□ 0.22
USP49-202ENST00000373010 FLVCR1Q9Y5Y0 555 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 PINLYPA6NC86 204 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 M0R135 149 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 RGS11O94810 467 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 CHRM2P08172 466 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 TMEM50BP56557 158 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 SORDQ00796 357 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 SSPNQ14714 243 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 UBE2V2Q15819 145 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 ZNF799Q96GE5 643 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 NUDT16L1Q9BRJ7 211 aaKnown RBP16.44■□□□□ 0.22
USP49-202ENST00000373010 MAB21L2Q9Y586 359 aa16.44■□□□□ 0.22
USP49-202ENST00000373010 CCDC187A0A096LP49 1063 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 OR2AT4A6NND4 320 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 RAD51DO75771 328 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 IKZF1Q13422 519 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 KISS1Q15726 138 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 H3F3CQ6NXT2 135 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 INTS12Q96CB8 462 aaKnown RBP16.43■□□□□ 0.22
USP49-202ENST00000373010 PLEKHA6Q9Y2H5 1048 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 V9GYS6 101 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 A0A0U1RQV5 110 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 DHRS3O75911 302 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 HLA-AP01891 365 aaKnown RBP16.43■□□□□ 0.22
USP49-202ENST00000373010 HIST1H1DP16402 221 aaKnown RBP16.43■□□□□ 0.22
USP49-202ENST00000373010 OTX1P32242 354 aaPredicted RBP16.43■□□□□ 0.22
USP49-202ENST00000373010 MRPS34P82930 218 aaKnown RBP16.43■□□□□ 0.22
USP49-202ENST00000373010 ECH1Q13011 328 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 TMUB2Q71RG4 321 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 KCNE4Q8WWG9 221 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 SF3B5Q9BWJ5 86 aaKnown RBP16.43■□□□□ 0.22
USP49-202ENST00000373010 CST11Q9H112 138 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 CRLF2Q9HC73 371 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 PIGLQ9Y2B2 252 aa16.43■□□□□ 0.22
USP49-202ENST00000373010 GPR179Q6PRD1 2367 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 HMSDA8MTL9 139 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 PRF1P14222 555 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 C4BPBP20851 252 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 HLXQ14774 488 aaPredicted RBP16.42■□□□□ 0.22
USP49-202ENST00000373010 SNAI3Q3KNW1 292 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 CLLU1Q5K131 121 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 FAM27BQ5VT28 67 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 C3P1Q6ZMU1 363 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 OR10K1Q8NGX5 313 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 ARHGAP5-AS1Q96IT6 56 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 TAAR9Q96RI9 348 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 STRADBQ9C0K7 418 aa16.42■□□□□ 0.22
USP49-202ENST00000373010 ZNF224Q9NZL3 707 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms