RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 TMEM50AO95807 157 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 GAPDHP04406 335 aaKnown RBP4.43□□□□□ -1.7
CCL20-201ENST00000358813 KITLGP21583 273 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 CPN2P22792 545 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 RPS3P23396 243 aaKnown RBP eCLIP4.43□□□□□ -1.72e-7■■■■□ 25.4
CCL20-201ENST00000358813 CD80P33681 288 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 RPS5P46782 204 aaKnown RBP4.43□□□□□ -1.7
CCL20-201ENST00000358813 DNASE1L1P49184 302 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 TMED10P49755 219 aaKnown RBP4.43□□□□□ -1.7
CCL20-201ENST00000358813 CCR8P51685 355 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 ARHGDIAP52565 204 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 TMEM50BP56557 158 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 RWDD2BP57060 319 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 TBPL1P62380 186 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 BASP1P80723 227 aaKnown RBP4.43□□□□□ -1.7
CCL20-201ENST00000358813 SARNPP82979 210 aaKnown RBP4.43□□□□□ -1.7
CCL20-201ENST00000358813 ASPHQ12797 758 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 IL18R1Q13478 541 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 ZNF146Q15072 292 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 TRIM16LQ309B1 348 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 VPS26BQ4G0F5 336 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 CCSMST1Q4G0I0 132 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 ZNF658BQ4V348 819 aaPredicted RBP4.43□□□□□ -1.7
CCL20-201ENST00000358813 HIKESHIQ53FT3 197 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 ADAMTSL4-AS1Q5T5F5 129 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 AGBL2Q5U5Z8 902 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 SLC22A10Q63ZE4 541 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 LRRC74BQ6ZQY2 392 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 PRSS41Q7RTY9 318 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 SPERTQ8NA61 448 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 OR5T3Q8NGG3 340 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 OR8K1Q8NGG5 319 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 OR13F1Q8NGS4 319 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 OR2T6Q8NHC8 308 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 LKAAEAR1Q8TD35 194 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 C9orf85Q96MD7 179 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 ZFP3Q96NJ6 502 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 CNN2Q99439 309 aaKnown RBP4.43□□□□□ -1.7
CCL20-201ENST00000358813 AIF1LQ9BQI0 150 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 SFXN3Q9BWM7 321 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 TSGA10Q9BZW7 698 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 PPA2Q9H2U2 334 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 PARLQ9H300 379 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 ZNF385DQ9H6B1 395 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 NIPAL2Q9H841 368 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 PLEKHF2Q9H8W4 249 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 TRIM45Q9H8W5 580 aaPredicted RBP4.43□□□□□ -1.7
CCL20-201ENST00000358813 ZDHHC11Q9H8X9 412 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 LRTM1Q9HBL6 345 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 ADAP2Q9NPF8 381 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 NUP50Q9UKX7 468 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 COPS3Q9UNS2 423 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 GAB2Q9UQC2 676 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 CPAMD8Q8IZJ3 1885 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 CSPG4Q6UVK1 2322 aa4.43□□□□□ -1.7
CCL20-201ENST00000358813 TEX48A0A1B0GUV7 120 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 A0A1W2PPV9 198 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 BTNL10A8MVZ5 291 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 E7ESA3 106 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 UBFD1O14562 309 aaKnown RBP4.42□□□□□ -1.7
CCL20-201ENST00000358813 CLOCKO15516 846 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 CXCL13O43927 109 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 GALR3O60755 368 aaPredicted RBP4.42□□□□□ -1.7
CCL20-201ENST00000358813 NIPSNAP2O75323 286 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 PSIP1O75475 530 aaKnown RBP4.42□□□□□ -1.7
CCL20-201ENST00000358813 EPPINO95925 133 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 PAHP00439 452 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 CRYGCP07315 174 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 UBTFL6P0CB48 400 aaPredicted RBP4.42□□□□□ -1.7
CCL20-201ENST00000358813 RRM2P31350 389 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 DAP3P51398 398 aaKnown RBP4.42□□□□□ -1.7
CCL20-201ENST00000358813 RAB8AP61006 207 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 BTN3A2P78410 334 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 BTG2P78543 158 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 ST3GAL3Q11203 375 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 CUL1Q13616 776 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 GRB7Q14451 532 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 CLEC12BQ2HXU8 276 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 CNPY1Q3B7I2 92 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 ZNF718Q3SXZ3 478 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 FBXL19-AS1Q494R0 122 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 FAM120AOSQ5T036 256 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 RUSC1-AS1Q66K80 236 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 TRIM40Q6P9F5 258 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 ZNF491Q8N8L2 437 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 CNEP1R1Q8N9A8 125 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 ZNF740Q8NDX6 193 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 TTLQ8NG68 377 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 OR2T33Q8NG76 320 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 NEIL3Q8TAT5 605 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 ACMSDQ8TDX5 336 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 GPX8Q8TED1 209 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 TCTEX1D2Q8WW35 142 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 TMEM80Q96HE8 168 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 PLEKHA8Q96JA3 519 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 ANKRD60Q9BZ19 345 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 IL22Q9GZX6 179 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 QPCTLQ9NXS2 382 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 NUDT4Q9NZJ9 180 aa4.42□□□□□ -1.7
CCL20-201ENST00000358813 SLC2A6Q9UGQ3 507 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms